Conservation of cofitness between CSW01_18515 and CSW01_05125 in Vibrio cholerae E7946 ATCC 55056

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_18515 DNA-binding transcriptional regulator DsdC 1.0 CSW01_05125 ribonuclease T 0.48 6
Escherichia coli BL21 0.56 ECD_02274 dsd operon activator; autorepressor 0.59 ECD_01622 RNase T; exoribonuclease T; structured DNA 3 — —
Escherichia coli BW25113 0.56 b2364 dsdC DNA-binding transcriptional dual regulator (NCBI) 0.60 b1652 rnt ribonuclease T (NCBI) — —
Escherichia coli ECOR38 0.56 HEPCGN_21665 dsdC DNA-binding transcriptional regulator DsdC 0.59 HEPCGN_05810 rnt ribonuclease T — —
Escherichia coli Nissle 1917 0.56 ECOLIN_RS13610 DNA-binding transcriptional regulator DsdC 0.59 ECOLIN_RS09210 ribonuclease T — —
Escherichia fergusonii Becca 0.56 EFB2_04194 HTH-type transcriptional regulator DsdC 0.59 EFB2_02340 Ribonuclease T — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.56 OHPLBJKB_01357 HTH-type transcriptional regulator DsdC 0.59 OHPLBJKB_02073 Ribonuclease T — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.55 GFF295 D-serine dehydratase transcriptional activator 0.59 GFF3622 Ribonuclease T (EC 3.1.13.-) — —
Klebsiella pneumoniae MKP103 0.55 KDGMDA_08550 DNA-binding transcriptional regulator DsdC 0.58 KDGMDA_23430 ribonuclease T low > 95
Klebsiella michiganensis M5al 0.54 BWI76_RS27850 DNA-binding transcriptional regulator DsdC 0.58 BWI76_RS16485 ribonuclease T low > 92
Serratia liquefaciens MT49 0.53 IAI46_12635 DNA-binding transcriptional regulator DsdC 0.59 IAI46_11265 ribonuclease T low > 87
Enterobacter sp. TBS_079 0.53 MPMX20_00025 HTH-type transcriptional regulator DsdC 0.60 MPMX20_01984 Ribonuclease T low > 85
Enterobacter asburiae PDN3 0.52 EX28DRAFT_3964 D-serine deaminase transcriptional activator 0.60 EX28DRAFT_1650 ribonuclease T low > 76
Pseudomonas fluorescens GW456-L13 0.39 PfGW456L13_3647 D-serine dehydratase transcriptional activator 0.52 PfGW456L13_1746 Ribonuclease T (EC 3.1.13.-) — —
Pseudomonas sp. BP01 0.38 JOY50_RS02965 dsdC DNA-binding transcriptional regulator DsdC 0.52 JOY50_RS14920 rnt ribonuclease T — —
Pseudomonas fluorescens FW300-N2E3 0.38 AO353_25215 transcriptional regulator 0.52 AO353_04120 ribonuclease T — —
Pantoea sp. MT58 0.37 IAI47_13360 DNA-binding transcriptional regulator DsdC 0.57 IAI47_10775 ribonuclease T low > 76
Pseudomonas sp. SVBP6 0.36 COO64_RS24655 dsdC DNA-binding transcriptional regulator DsdC 0.53 COO64_RS16855 rnt ribonuclease T — —
Pseudomonas simiae WCS417 0.25 PS417_00145 LysR family transcriptional regulator 0.52 PS417_05625 ribonuclease T — —
Pseudomonas lactucae CFBP13502 0.25 GEMAOFIL_00235 HTH-type transcriptional regulator PerR 0.52 GEMAOFIL_01312 Ribonuclease T — —
Pseudomonas sp. RS175 0.24 PFR28_04651 Glycine cleavage system transcriptional activator 0.52 PFR28_03356 Ribonuclease T — —
Pseudomonas aeruginosa MRSN321 0.24 DY961_RS26360 LysR family transcriptional regulator 0.54 DY961_RS15375 rnt;go_function=RNA ribonuclease T low > 100
Pseudomonas fluorescens FW300-N2C3 0.24 AO356_11335 LysR family transcriptional regulator 0.52 AO356_18310 ribonuclease T — —
Pseudomonas aeruginosa PUPa3 0.24 DQ20_RS58765 LysR family transcriptional regulator 0.54 DQ20_RS41775 rnt;go_function=RNA ribonuclease T — —
Pseudomonas aeruginosa PA14 0.24 IKLFDK_25400 LysR family transcriptional regulator 0.54 IKLFDK_18010 ribonuclease T — —
Pseudomonas syringae pv. syringae B728a 0.24 Psyr_0030 transcriptional regulator, LysR family 0.53 Psyr_3895 RNAse T — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.24 Psyr_0030 transcriptional regulator, LysR family 0.53 Psyr_3895 RNAse T — —
Pseudomonas segetis P6 0.22 MPMX49_00287 Glycine cleavage system transcriptional activator 0.52 MPMX49_01444 Ribonuclease T — —

Not shown: 6 genomes with orthologs for CSW01_18515 only; 38 genomes with orthologs for CSW01_05125 only