Conservation of cofitness between CSW01_05895 and CSW01_05070 in Vibrio cholerae E7946 ATCC 55056

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_05895 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 1.0 CSW01_05070 N-acetylglucosamine-6-phosphate deacetylase 0.60 7
Klebsiella michiganensis M5al 0.67 BWI76_RS18195 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.64 BWI76_RS08210 N-acetylglucosamine-6-phosphate deacetylase low > 92
Dickeya dianthicola 67-19 0.67 HGI48_RS10065 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.63 HGI48_RS06350 N-acetylglucosamine-6-phosphate deacetylase low > 71
Erwinia tracheiphila SCR3 0.67 LU632_RS13460 cmoB tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.61 LU632_RS16250 nagA N-acetylglucosamine-6-phosphate deacetylase low > 74
Dickeya dianthicola ME23 0.67 DZA65_RS10475 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.63 DZA65_RS06695 N-acetylglucosamine-6-phosphate deacetylase 0.24 70
Dickeya dadantii 3937 0.66 DDA3937_RS10035 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.64 DDA3937_RS06305 N-acetylglucosamine-6-phosphate deacetylase low > 74
Rahnella sp. WP5 0.66 EX31_RS17290 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.67 EX31_RS23260 N-acetylglucosamine-6-phosphate deacetylase low > 89
Serratia liquefaciens MT49 0.66 IAI46_14675 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.65 IAI46_06085 N-acetylglucosamine-6-phosphate deacetylase low > 86
Escherichia coli ECRC62 0.66 BNILDI_15455 cmoB tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.63 BNILDI_21550 nagA N-acetylglucosamine-6-phosphate deacetylase low > 75
Escherichia coli ECRC99 0.66 KEDOAH_01885 cmoB tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.63 KEDOAH_20805 nagA N-acetylglucosamine-6-phosphate deacetylase — —
Escherichia coli BL21 0.66 ECD_01842 tRNA (cmo5U34)-carboxymethyltransferase, carboxy-SAM-dependent 0.63 ECD_00634 N-acetylglucosamine-6-phosphate deacetylase low > 61
Escherichia coli ECRC101 0.66 MCAODC_19185 cmoB tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.63 MCAODC_26380 nagA N-acetylglucosamine-6-phosphate deacetylase low > 87
Escherichia coli ECRC102 0.66 NIAGMN_01840 cmoB tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.63 NIAGMN_05220 nagA N-acetylglucosamine-6-phosphate deacetylase — —
Escherichia coli ECRC100 0.66 OKFHMN_26220 cmoB tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.63 OKFHMN_07165 nagA N-acetylglucosamine-6-phosphate deacetylase low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.66 OHPLBJKB_01857 tRNA U34 carboxymethyltransferase 0.63 OHPLBJKB_03038 N-acetylglucosamine-6-phosphate deacetylase low > 73
Enterobacter asburiae PDN3 0.66 EX28DRAFT_0686 tRNA (mo5U34)-methyltransferase 0.64 EX28DRAFT_2298 N-acetylglucosamine-6-phosphate deacetylase 0.45 45
Escherichia coli ECRC98 0.66 JDDGAC_00795 cmoB tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.63 JDDGAC_10815 nagA N-acetylglucosamine-6-phosphate deacetylase low > 86
Escherichia coli ECOR38 0.66 HEPCGN_04630 cmoB tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.63 HEPCGN_01065 nagA N-acetylglucosamine-6-phosphate deacetylase low > 87
Escherichia coli ECOR27 0.66 NOLOHH_16665 cmoB tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.63 NOLOHH_23545 nagA N-acetylglucosamine-6-phosphate deacetylase low > 75
Escherichia coli BW25113 0.66 b1871 yecP predicted S-adenosyl-L-methionine-dependent methyltransferase (NCBI) 0.63 b0677 nagA N-acetylglucosamine-6-phosphate deacetylase (NCBI) low > 76
Escherichia coli Nissle 1917 0.66 ECOLIN_RS10700 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.63 ECOLIN_RS03615 N-acetylglucosamine-6-phosphate deacetylase — —
Escherichia fergusonii Becca 0.66 EFB2_02071 tRNA U34 carboxymethyltransferase 0.63 EFB2_03426 N-acetylglucosamine-6-phosphate deacetylase low > 86
Pectobacterium carotovorum WPP14 0.65 HER17_RS11890 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.64 HER17_RS15110 N-acetylglucosamine-6-phosphate deacetylase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF1652 tRNA (5-methoxyuridine) 34 synthase 0.62 GFF4585 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) low > 78
Enterobacter sp. TBS_079 0.65 MPMX20_02776 tRNA U34 carboxymethyltransferase 0.63 MPMX20_01323 N-acetylglucosamine-6-phosphate deacetylase low > 85
Pantoea sp. MT58 0.64 IAI47_08405 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.64 IAI47_13885 N-acetylglucosamine-6-phosphate deacetylase low > 76
Shewanella loihica PV-4 0.64 Shew_2082 putative methyltransferase (RefSeq) 0.30 Shew_1117 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) low > 60
Shewanella oneidensis MR-1 0.64 SO2436 methyltransferase, putative (NCBI ptt file) 0.31 SO3505 nagA N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) low > 76
Shewanella amazonensis SB2B 0.63 Sama_1846 methyltransferase, putative (RefSeq) 0.29 Sama_0946 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) low > 62
Alteromonas macleodii MIT1002 0.59 MIT1002_02226 tRNA (mo5U34)-methyltransferase 0.27 MIT1002_00910 N-acetylglucosamine-6-phosphate deacetylase 0.92 3
Pseudomonas fluorescens FW300-N2C3 0.52 AO356_06450 tRNA (mo5U34)-methyltransferase 0.18 AO356_17550 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) low > 104
Pseudomonas fluorescens GW456-L13 0.52 PfGW456L13_4812 tRNA (5-methoxyuridine) 34 synthase 0.20 PfGW456L13_4830 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) low > 87

Not shown: 15 genomes with orthologs for CSW01_05895 only; 30 genomes with orthologs for CSW01_05070 only