Conservation of cofitness between CSW01_09650 and CSW01_04595 in Vibrio cholerae E7946 ATCC 55056

18 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_09650 C4-dicarboxylate ABC transporter 1.0 CSW01_04595 DUF423 domain-containing protein 0.52 6
Pseudomonas sp. DMC3 0.55 GFF1146 C4-dicarboxylate-binding periplasmic protein DctP 0.38 GFF221 hypothetical protein low > 89
Pseudomonas segetis P6 0.54 ACVTMO_RS21730 dctP C4-dicarboxylate TRAP substrate-binding protein DctP 0.40 ACVTMO_RS21880 DUF423 domain-containing protein low > 75
Pseudomonas aeruginosa PA14 0.53 IKLFDK_27650 C4-dicarboxylate TRAP substrate-binding protein DctP 0.38 IKLFDK_23530 DUF423 domain-containing protein low > 98
Pseudomonas aeruginosa PUPa3 0.53 DQ20_RS50415 dctP;inference=COORDINATES C4-dicarboxylate TRAP substrate-binding protein DctP 0.38 DQ20_RS37425 DUF423 domain-containing protein low > 101
Pseudomonas aeruginosa MRSN321 0.53 DY961_RS11685 dctP;inference=COORDINATES C4-dicarboxylate TRAP substrate-binding protein DctP 0.38 DY961_RS21870 DUF423 domain-containing protein low > 99
Pseudomonas stutzeri RCH2 0.53 Psest_4268 tripartite ATP-independent periplasmic transporter solute receptor, DctP family 0.37 Psest_0265 Uncharacterized small membrane protein low > 67
Pseudomonas sp. RS175 0.53 PFR28_00119 C4-dicarboxylate-binding periplasmic protein DctP 0.33 PFR28_04254 hypothetical protein low > 88
Pseudomonas protegens RBAN4 0.50 FABNJH_13890 dctP C4-dicarboxylate-binding periplasmic protein DctP 0.37 FABNJH_29495 DUF423 domain-containing protein
Pseudomonas fluorescens SBW25 0.50 PFLU_RS16930 TRAP transporter substrate-binding protein 0.38 PFLU_RS28430 DUF423 domain-containing protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.50 PFLU_RS16930 TRAP transporter substrate-binding protein 0.38 PFLU_RS28430 DUF423 domain-containing protein low > 109
Pseudomonas simiae WCS417 0.49 PS417_14910 C4-dicarboxylate ABC transporter 0.37 PS417_26785 membrane protein low > 88
Shewanella sp. ANA-3 0.49 Shewana3_1416 TRAP dicarboxylate transporter, DctP subunit (RefSeq) 0.34 Shewana3_2892 hypothetical protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.48 SO3134 dctP C4-dicarboxylate-binding periplasmic protein (NCBI ptt file) 0.34 SO1535 conserved hypothetical protein (NCBI ptt file) low > 76
Pseudomonas fluorescens FW300-N2C3 0.48 AO356_06880 C4-dicarboxylate ABC transporter 0.32 AO356_13365 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.48 Pf6N2E2_3238 TRAP-type C4-dicarboxylate transport system, periplasmic component 0.34 Pf6N2E2_4588 COG2363 low > 103
Shewanella loihica PV-4 0.47 Shew_1446 dicarboxylate TRAP transporter (succinate, fumarate, L-malate, and alpha-ketoglutarate), solute receptor component (from data) 0.41 Shew_2762 hypothetical protein (RefSeq)
Pseudomonas sp. S08-1 0.40 OH686_16140 TRAP-type transporter, substrate-binding protein 0.36 OH686_14275 hypothetical regulator low > 80
Herbaspirillum seropedicae SmR1 0.36 HSERO_RS04240 C4-dicarboxylate ABC transporter 0.38 HSERO_RS06075 membrane protein low > 78

Not shown: 9 genomes with orthologs for CSW01_09650 only; 46 genomes with orthologs for CSW01_04595 only