Conservation of cofitness between CSW01_10815 and CSW01_04570 in Vibrio cholerae E7946 ATCC 55056

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_10815 Cys-tRNA(Pro) deacylase 1.0 CSW01_04570 exodeoxyribonuclease 7 small subunit 0.46 12
Pectobacterium carotovorum WPP14 0.57 HER17_RS15635 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.57 HER17_RS15925 exodeoxyribonuclease VII small subunit low > 75
Escherichia fergusonii Becca 0.56 EFB2_03577 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.55 EFB2_03635 Exodeoxyribonuclease 7 small subunit low > 86
Escherichia coli Nissle 1917 0.56 ECOLIN_RS02850 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.55 ECOLIN_RS02545 exodeoxyribonuclease VII small subunit — —
Rahnella sp. WP5 0.55 EX31_RS22565 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.54 EX31_RS22165 exodeoxyribonuclease VII small subunit — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.55 OHPLBJKB_03193 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.55 OHPLBJKB_03254 Exodeoxyribonuclease 7 small subunit — —
Pantoea agglomerans CFBP13505 P0401 0.55 PagCFBP13505_RS10790 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.53 PagCFBP13505_RS10465 exodeoxyribonuclease VII small subunit — —
Escherichia coli BW25113 0.55 b0481 ybaK hypothetical protein (NCBI) 0.55 b0422 xseB exodeoxyribonuclease VII small subunit (NCBI) — —
Escherichia coli ECOR38 0.55 HEPCGN_06725 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.55 HEPCGN_07040 xseB exodeoxyribonuclease VII small subunit — —
Escherichia coli BL21 0.55 ECD_00432 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase 0.55 ECD_00370 exonuclease VII small subunit — —
Escherichia coli ECRC62 0.55 BNILDI_22455 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.55 BNILDI_22775 xseB exodeoxyribonuclease VII small subunit — —
Escherichia coli ECOR27 0.55 NOLOHH_01035 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.55 NOLOHH_01360 xseB exodeoxyribonuclease VII small subunit — —
Serratia liquefaciens MT49 0.55 IAI46_05300 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.53 IAI46_04935 exodeoxyribonuclease VII small subunit low > 87
Escherichia coli ECRC101 0.55 MCAODC_27325 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.55 MCAODC_27635 xseB exodeoxyribonuclease VII small subunit — —
Escherichia coli ECRC102 0.55 NIAGMN_06155 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.55 NIAGMN_06465 xseB exodeoxyribonuclease VII small subunit low > 80
Escherichia coli ECRC98 0.55 JDDGAC_11750 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.55 JDDGAC_12065 xseB exodeoxyribonuclease VII small subunit — —
Escherichia coli ECRC100 0.55 OKFHMN_08105 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.55 OKFHMN_08410 xseB exodeoxyribonuclease VII small subunit low > 79
Escherichia coli ECRC99 0.55 KEDOAH_19865 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.55 KEDOAH_19555 xseB exodeoxyribonuclease VII small subunit — —
Erwinia amylovora T8 0.54 OLJFJH_17720 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.54 OLJFJH_18055 exodeoxyribonuclease VII small subunit — —
Pantoea sp. MT58 0.54 IAI47_14410 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.51 IAI47_14730 exodeoxyribonuclease VII small subunit low > 76
Klebsiella pneumoniae MKP103 0.54 KDGMDA_14930 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.55 KDGMDA_14480 exodeoxyribonuclease VII small subunit — —
Enterobacter sp. TBS_079 0.54 MPMX20_01082 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.57 MPMX20_01013 Exodeoxyribonuclease 7 small subunit — —
Klebsiella michiganensis M5al 0.54 BWI76_RS06870 aminoacyl-tRNA deacylase 0.57 BWI76_RS06390 exodeoxyribonuclease VII small subunit — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.53 GFF4401 Cys-tRNA(Pro) deacylase YbaK 0.50 GFF4326 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) — —
Enterobacter asburiae PDN3 0.53 EX28DRAFT_2477 Cys-tRNA(Pro) deacylase 0.57 EX28DRAFT_2549 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) — —
Pseudomonas aeruginosa MRSN321 0.52 DY961_RS15090 ybaK;go_function=aminoacyl-tRNA Cys-tRNA(Pro) deacylase 0.39 DY961_RS27675 exodeoxyribonuclease VII small subunit low > 100
Pseudomonas aeruginosa PUPa3 0.52 DQ20_RS42050 ybaK;go_function=aminoacyl-tRNA Cys-tRNA(Pro) deacylase 0.39 DQ20_RS47970 exodeoxyribonuclease VII small subunit low > 101
Erwinia tracheiphila SCR3 0.51 LU632_RS15310 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.51 LU632_RS18840 xseB exodeoxyribonuclease VII small subunit — —
Pseudomonas sp. SVBP6 0.51 COO64_RS16810 ybaK Cys-tRNA(Pro) deacylase 0.37 COO64_RS15820 exodeoxyribonuclease VII small subunit — —
Erwinia tracheiphila HP pepo 2.2 0.50 IJEDHG_01120 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.51 IJEDHG_26040 xseB exodeoxyribonuclease VII small subunit — —
Shewanella sp. ANA-3 0.50 Shewana3_0957 ybaK/ebsC protein (RefSeq) 0.56 Shewana3_2899 exodeoxyribonuclease VII small subunit (RefSeq) — —
Dickeya dadantii 3937 0.50 DDA3937_RS05835 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.55 DDA3937_RS05540 exodeoxyribonuclease VII small subunit — —
Shewanella amazonensis SB2B 0.49 Sama_0531 YbaK/EbsC protein (RefSeq) 0.59 Sama_2434 exodeoxyribonuclease VII, small subunit (RefSeq) low > 62
Pseudomonas segetis P6 0.45 MPMX49_01431 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.35 MPMX49_01007 Exodeoxyribonuclease 7 small subunit low > 75
Dickeya dianthicola 67-19 0.43 HGI48_RS05880 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.53 HGI48_RS05600 exodeoxyribonuclease VII small subunit — —
Dickeya dianthicola ME23 0.43 DZA65_RS06215 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.52 DZA65_RS05925 exodeoxyribonuclease VII small subunit — —
Shewanella loihica PV-4 0.42 Shew_0016 ybaK/ebsC protein (RefSeq) 0.49 Shew_2769 exodeoxyribonuclease VII, small subunit (RefSeq) — —

Not shown: 61 genomes with orthologs for CSW01_10815 only; 2 genomes with orthologs for CSW01_04570 only