Conservation of cofitness between CSW01_16805 and CSW01_03475 in Vibrio cholerae E7946 ATCC 55056

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_16805 anaerobic ribonucleoside-triphosphate reductase activating protein 1.0 CSW01_03475 ATP-dependent RNA helicase SrmB 0.49 11
Serratia liquefaciens MT49 0.77 IAI46_02130 anaerobic ribonucleoside-triphosphate reductase-activating protein 0.58 IAI46_19600 ATP-dependent RNA helicase SrmB low > 87
Klebsiella michiganensis M5al 0.74 BWI76_RS02930 anaerobic ribonucleoside-triphosphate reductase activating protein 0.58 BWI76_RS21370 ATP-dependent RNA helicase SrmB low > 92
Klebsiella pneumoniae MKP103 0.72 KDGMDA_11400 anaerobic ribonucleoside-triphosphate reductase-activating protein 0.56 KDGMDA_28495 ATP-dependent RNA helicase SrmB low > 95
Pectobacterium carotovorum WPP14 0.72 HER17_RS19530 anaerobic ribonucleoside-triphosphate reductase-activating protein 0.57 HER17_RS05765 ATP-dependent RNA helicase SrmB low > 75
Shewanella sp. ANA-3 0.72 Shewana3_2602 nrdG anaerobic ribonucleotide reductase-activating protein (RefSeq) 0.52 Shewana3_3336 ATP-dependent RNA helicase SrmB (RefSeq) low > 73
Escherichia coli HS(pFamp)R (ATCC 700891) 0.72 OHPLBJKB_03798 Anaerobic ribonucleoside-triphosphate reductase-activating protein 0.56 OHPLBJKB_01131 ATP-dependent RNA helicase SrmB low > 74
Escherichia fergusonii Becca 0.72 EFB2_04296 Anaerobic ribonucleoside-triphosphate reductase-activating protein 0.56 EFB2_01320 ATP-dependent RNA helicase SrmB low > 86
Escherichia coli ECRC101 0.72 MCAODC_02420 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein 0.56 MCAODC_11890 srmB ATP-dependent RNA helicase SrmB low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.72 GFF918 Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) 0.57 GFF2104 ATP-dependent RNA helicase SrmB low > 78
Escherichia coli ECRC100 0.72 OKFHMN_11915 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein 0.56 OKFHMN_21360 srmB ATP-dependent RNA helicase SrmB low > 79
Escherichia coli ECRC62 0.72 BNILDI_07335 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein 0.56 BNILDI_11835 srmB ATP-dependent RNA helicase SrmB low > 75
Escherichia coli Nissle 1917 0.72 ECOLIN_RS24580 anaerobic ribonucleoside-triphosphate reductase-activating protein 0.56 ECOLIN_RS14580 ATP-dependent RNA helicase SrmB low > 55
Escherichia coli BW25113 0.72 b4237 nrdG anaerobic ribonucleotide reductase activating protein (NCBI) 0.56 b2576 srmB ATP-dependent RNA helicase (NCBI) low > 76
Escherichia coli ECOR38 0.72 HEPCGN_10110 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein 0.56 HEPCGN_20505 srmB ATP-dependent RNA helicase SrmB low > 88
Rahnella sp. WP5 0.72 EX31_RS08400 anaerobic ribonucleoside-triphosphate reductase-activating protein 0.58 EX31_RS21785 ATP-dependent RNA helicase SrmB 0.28 82
Escherichia coli ECRC99 0.72 KEDOAH_16240 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein 0.56 KEDOAH_06860 srmB ATP-dependent RNA helicase SrmB — —
Escherichia coli ECOR27 0.72 NOLOHH_04175 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein 0.56 NOLOHH_13035 srmB ATP-dependent RNA helicase SrmB low > 76
Escherichia coli ECRC102 0.72 NIAGMN_09765 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein 0.56 NIAGMN_19130 srmB ATP-dependent RNA helicase SrmB low > 80
Escherichia coli ECRC98 0.72 JDDGAC_15555 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein 0.56 JDDGAC_25025 srmB ATP-dependent RNA helicase SrmB low > 87
Shewanella oneidensis MR-1 0.71 SO2833 nrdG anaerobic ribonucleoside-triphosphate reductase activating protein (NCBI ptt file) 0.52 SO0947 srmB ATP-dependent RNA helicase SrmB (NCBI ptt file) low > 76
Escherichia coli BL21 0.71 ECD_04105 anaerobic ribonucleotide reductase activating protein 0.56 ECD_02470 ATP-dependent RNA helicase low > 61
Erwinia tracheiphila SCR3 0.71 LU632_RS20980 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein 0.58 LU632_RS15440 srmB ATP-dependent RNA helicase SrmB 0.40 38
Erwinia tracheiphila HP pepo 2.2 0.70 IJEDHG_14030 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein 0.58 IJEDHG_01260 srmB ATP-dependent RNA helicase SrmB low > 61
Shewanella loihica PV-4 0.70 Shew_2448 nrdG anaerobic ribonucleotide reductase-activating protein (RefSeq) 0.52 Shew_0767 ATP-dependent RNA helicase SrmB (RefSeq) low > 60
Dickeya dadantii 3937 0.70 DDA3937_RS01870 anaerobic ribonucleoside-triphosphate reductase-activating protein 0.56 DDA3937_RS15780 ATP-dependent RNA helicase SrmB low > 74
Enterobacter asburiae PDN3 0.70 EX28DRAFT_3436 anaerobic ribonucleoside-triphosphate reductase activating protein 0.57 EX28DRAFT_0069 Superfamily II DNA and RNA helicases low > 76
Dickeya dianthicola ME23 0.69 DZA65_RS01875 anaerobic ribonucleoside-triphosphate reductase-activating protein 0.56 DZA65_RS16945 ATP-dependent RNA helicase SrmB low > 75
Enterobacter sp. TBS_079 0.69 MPMX20_00530 Anaerobic ribonucleoside-triphosphate reductase-activating protein 0.57 MPMX20_03447 ATP-dependent RNA helicase SrmB low > 85
Dickeya dianthicola 67-19 0.69 HGI48_RS01820 anaerobic ribonucleoside-triphosphate reductase-activating protein 0.56 HGI48_RS15865 ATP-dependent RNA helicase SrmB low > 71
Pantoea sp. MT58 0.68 IAI47_16930 anaerobic ribonucleoside-triphosphate reductase-activating protein 0.60 IAI47_04835 ATP-dependent RNA helicase SrmB low > 76
Pantoea agglomerans CFBP13505 P0401 0.66 PagCFBP13505_RS09025 anaerobic ribonucleoside-triphosphate reductase-activating protein 0.59 PagCFBP13505_RS14725 ATP-dependent RNA helicase SrmB low > 74
Erwinia amylovora T8 0.64 OLJFJH_07300 anaerobic ribonucleoside-triphosphate reductase-activating protein 0.59 OLJFJH_10200 ATP-dependent RNA helicase SrmB low > 58

Not shown: 6 genomes with orthologs for CSW01_16805 only; 3 genomes with orthologs for CSW01_03475 only