Conservation of cofitness between CSW01_19345 and CSW01_03150 in Vibrio cholerae E7946 ATCC 55056

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_19345 YccF domain-containing protein 1.0 CSW01_03150 tRNA glutamyl-Q(34) synthetase GluQRS 0.39 20
Shewanella oneidensis MR-1 0.64 SO1977 conserved hypothetical protein (NCBI ptt file) 0.47 SO0873 glutamyl-tRNA synthetase domain protein (NCBI ptt file) — —
Shewanella sp. ANA-3 0.63 Shewana3_2470 hypothetical protein (RefSeq) 0.47 Shewana3_3405 glutamyl-tRNA synthetase, class Ic (RefSeq) low > 73
Shewanella amazonensis SB2B 0.63 Sama_1575 hypothetical protein (RefSeq) 0.48 Sama_0779 glutamyl-tRNA synthetase domain-containing protein (RefSeq) low > 62
Shewanella loihica PV-4 0.61 Shew_2148 hypothetical protein (RefSeq) 0.50 Shew_3130 glutamate--tRNA ligase (RefSeq) low > 60
Pectobacterium carotovorum WPP14 0.37 HER17_RS08440 YccF domain-containing protein 0.53 HER17_RS05575 tRNA glutamyl-Q(34) synthetase GluQRS low > 75
Serratia liquefaciens MT49 0.37 IAI46_08895 YccF domain-containing protein 0.51 IAI46_21215 tRNA glutamyl-Q(34) synthetase GluQRS low > 86
Rahnella sp. WP5 0.36 EX31_RS18020 YccF domain-containing protein 0.50 EX31_RS03255 tRNA glutamyl-Q(34) synthetase GluQRS low > 89
Erwinia amylovora T8 0.34 OLJFJH_15915 YccF domain-containing protein 0.48 OLJFJH_00770 tRNA glutamyl-Q(34) synthetase GluQRS low > 58
Klebsiella pneumoniae MKP103 0.34 KDGMDA_18220 YccF domain-containing protein 0.51 KDGMDA_13265 tRNA glutamyl-Q(34) synthetase GluQRS low > 95
Enterobacter sp. TBS_079 0.34 MPMX20_01611 Inner membrane protein YccF 0.50 MPMX20_00830 Glutamyl-Q tRNA(Asp) synthetase low > 85
Erwinia tracheiphila SCR3 0.34 LU632_RS10045 YccF domain-containing protein 0.47 LU632_RS20085 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS low > 74
Enterobacter asburiae PDN3 0.33 EX28DRAFT_1982 Predicted membrane protein 0.49 EX28DRAFT_3733 glutamyl-queuosine tRNA(Asp) synthetase low > 76
Klebsiella michiganensis M5al 0.33 BWI76_RS09990 hypothetical protein 0.49 BWI76_RS05010 tRNA glutamyl-Q synthetase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.33 GFF3252 Inner membrane protein YccF 0.52 GFF88 glutamyl-Q-tRNA synthetase low > 78
Dickeya dianthicola 67-19 0.32 HGI48_RS15300 YccF domain-containing protein 0.52 HGI48_RS16055 tRNA glutamyl-Q(34) synthetase GluQRS low > 71
Dickeya dianthicola ME23 0.32 DZA65_RS16125 YccF domain-containing protein 0.52 DZA65_RS17140 tRNA glutamyl-Q(34) synthetase GluQRS 0.42 6
Dickeya dadantii 3937 0.32 DDA3937_RS15225 YccF domain-containing protein 0.52 DDA3937_RS15940 tRNA glutamyl-Q(34) synthetase GluQRS low > 74
Escherichia coli BL21 0.31 ECD_00965 DUF307 family inner membrane protein 0.53 ECD_00143 glutamyl-Q tRNA(Asp) synthetase — —
Escherichia coli ECOR27 0.31 NOLOHH_21770 yccF YccF domain-containing protein 0.53 NOLOHH_02695 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS low > 76
Escherichia coli ECOR38 0.31 HEPCGN_23305 yccF YccF domain-containing protein 0.52 HEPCGN_08300 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.31 OHPLBJKB_02705 Inner membrane protein YccF 0.53 OHPLBJKB_03518 Glutamyl-Q tRNA(Asp) synthetase low > 74
Escherichia coli BW25113 0.31 b0961 yccF conserved inner membrane protein (NCBI) 0.53 b0144 yadB glutamyl-Q tRNA(Asp) synthetase (RefSeq) low > 76
Escherichia fergusonii Becca 0.31 EFB2_03110 Inner membrane protein YccF 0.53 EFB2_03900 Glutamyl-Q tRNA(Asp) synthetase low > 86
Escherichia coli Nissle 1917 0.31 ECOLIN_RS05050 YccF domain-containing protein 0.53 ECOLIN_RS00795 tRNA glutamyl-Q(34) synthetase GluQRS low > 55
Escherichia coli ECRC62 0.31 BNILDI_19935 yccF YccF domain-containing protein 0.53 BNILDI_08975 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS low > 75
Escherichia coli ECRC98 0.31 JDDGAC_08825 yccF YccF domain-containing protein 0.53 JDDGAC_13945 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS low > 87
Escherichia coli ECRC101 0.31 MCAODC_24605 yccF YccF domain-containing protein 0.53 MCAODC_00865 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS low > 88
Escherichia coli ECRC100 0.31 OKFHMN_05215 yccF YccF domain-containing protein 0.53 OKFHMN_10350 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS low > 79
Escherichia coli ECRC99 0.31 KEDOAH_22520 yccF YccF domain-containing protein 0.53 KEDOAH_17805 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS — —
Escherichia coli ECRC102 0.31 NIAGMN_02935 yccF YccF domain-containing protein 0.53 NIAGMN_08200 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS — —
Pantoea sp. MT58 0.29 IAI47_12625 YccF domain-containing protein 0.47 IAI47_15640 tRNA glutamyl-Q(34) synthetase GluQRS low > 76
Pantoea agglomerans CFBP13505 P0401 0.29 PagCFBP13505_RS04705 YccF domain-containing protein 0.47 PagCFBP13505_RS13360 tRNA glutamyl-Q(34) synthetase GluQRS low > 74
Kangiella aquimarina DSM 16071 0.28 B158DRAFT_0561 Predicted membrane protein 0.44 B158DRAFT_0057 glutamyl-queuosine tRNA(Asp) synthetase low > 40

Not shown: 16 genomes with orthologs for CSW01_19345 only; 52 genomes with orthologs for CSW01_03150 only