Conservation of cofitness between CSW01_08435 and CSW01_02835 in Vibrio cholerae E7946 ATCC 55056

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_08435 phage shock protein PspA 1.0 CSW01_02835 RNA polymerase sigma factor RpoS 0.62 3
Serratia liquefaciens MT49 0.59 IAI46_13500 phage shock protein PspA 0.70 IAI46_03790 RNA polymerase sigma factor RpoS low > 87
Rahnella sp. WP5 0.59 EX31_RS15685 phage shock protein PspA 0.70 EX31_RS07825 RNA polymerase sigma factor RpoS low > 89
Enterobacter sp. TBS_079 0.59 MPMX20_02472 Phage shock protein A 0.70 MPMX20_03627 RNA polymerase sigma factor RpoS low > 85
Dickeya dadantii 3937 0.59 DDA3937_RS12425 phage shock protein PspA 0.69 DDA3937_RS16875 RNA polymerase sigma factor RpoS — —
Enterobacter asburiae PDN3 0.58 EX28DRAFT_0976 phage shock protein A (PspA) family protein 0.70 EX28DRAFT_2837 RNA polymerase, sigma 38 subunit, RpoS low > 76
Dickeya dianthicola ME23 0.58 DZA65_RS12945 phage shock protein PspA 0.68 DZA65_RS18020 RNA polymerase sigma factor RpoS low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.58 GFF2686 Phage shock protein A 0.70 GFF4788 RNA polymerase sigma factor RpoS low > 78
Dickeya dianthicola 67-19 0.58 HGI48_RS12495 phage shock protein PspA 0.68 HGI48_RS16945 RNA polymerase sigma factor RpoS low > 71
Escherichia coli ECRC62 0.58 BNILDI_18245 pspA phage shock protein PspA 0.70 BNILDI_10860 rpoS RNA polymerase sigma factor RpoS low > 75
Escherichia coli ECRC98 0.58 JDDGAC_04955 pspA phage shock protein PspA 0.70 JDDGAC_24160 rpoS RNA polymerase sigma factor RpoS low > 87
Escherichia coli ECOR38 0.58 HEPCGN_25790 pspA phage shock protein PspA 0.70 HEPCGN_19675 rpoS RNA polymerase sigma factor RpoS low > 88
Escherichia coli BL21 0.58 ECD_01281 regulatory protein for phage-shock-protein operon 0.70 ECD_02591 RNA polymerase, sigma S (sigma 38) factor 0.77 32
Escherichia coli ECRC101 0.58 MCAODC_15860 pspA phage shock protein PspA 0.70 MCAODC_11020 rpoS RNA polymerase sigma factor RpoS low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.58 OHPLBJKB_02378 Phage shock protein A 0.70 OHPLBJKB_00992 RNA polymerase sigma factor RpoS low > 74
Klebsiella michiganensis M5al 0.58 BWI76_RS12450 phage shock protein PspA 0.70 BWI76_RS22645 RNA polymerase sigma factor RpoS low > 92
Escherichia coli BW25113 0.58 b1304 pspA regulatory protein for phage-shock-protein operon (NCBI) 0.70 b2741 rpoS RNA polymerase sigma factor (NCBI) low > 76
Escherichia coli ECRC102 0.58 NIAGMN_26580 pspA phage shock protein PspA 0.70 NIAGMN_18265 rpoS RNA polymerase sigma factor RpoS low > 80
Escherichia coli ECOR27 0.58 NOLOHH_20095 pspA phage shock protein PspA 0.70 NOLOHH_12310 rpoS RNA polymerase sigma factor RpoS low > 76
Escherichia coli ECRC100 0.58 OKFHMN_02410 pspA phage shock protein PspA 0.70 OKFHMN_20495 rpoS RNA polymerase sigma factor RpoS low > 79
Pantoea sp. MT58 0.58 IAI47_09395 phage shock protein PspA 0.71 IAI47_04235 RNA polymerase sigma factor RpoS low > 76
Pectobacterium carotovorum WPP14 0.58 HER17_RS09520 phage shock protein PspA 0.68 HER17_RS04350 RNA polymerase sigma factor RpoS low > 75
Klebsiella pneumoniae MKP103 0.58 KDGMDA_19920 phage shock protein PspA 0.70 KDGMDA_03220 RNA polymerase sigma factor RpoS — —
Escherichia fergusonii Becca 0.57 EFB2_02623 Phage shock protein A 0.70 EFB2_01169 RNA polymerase sigma factor RpoS low > 86
Erwinia amylovora T8 0.56 OLJFJH_13675 phage shock protein PspA 0.70 OLJFJH_09380 RNA polymerase sigma factor RpoS low > 58
Erwinia tracheiphila SCR3 0.55 LU632_RS11560 pspA phage shock protein PspA 0.69 LU632_RS06480 rpoS RNA polymerase sigma factor RpoS low > 73
Erwinia tracheiphila HP pepo 2.2 0.55 IJEDHG_23020 pspA phage shock protein PspA 0.69 IJEDHG_17500 rpoS RNA polymerase sigma factor RpoS low > 61
Shewanella sp. ANA-3 0.53 Shewana3_2648 phage shock protein A, PspA (RefSeq) 0.66 Shewana3_1124 RNA polymerase, sigma 38 subunit, RpoS (RefSeq) low > 73
Shewanella oneidensis MR-1 0.53 SO1807 pspA phage shock protein A (NCBI ptt file) 0.66 SO3432 rpoS RNA polymerase sigma-38 factor (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.51 Sama_1237 phage shock protein A (RefSeq) 0.68 Sama_1044 RNA polymerase sigma-38 factor (RefSeq) low > 62
Shewanella loihica PV-4 0.51 Shew_2496 phage shock protein A, PspA (RefSeq) 0.68 Shew_1213 RpoD family RNA polymerase sigma factor (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.51 MIT1002_01143 Phage shock protein A 0.69 MIT1002_00625 RNA polymerase sigma factor RpoS low > 70

Not shown: 12 genomes with orthologs for CSW01_08435 only; 31 genomes with orthologs for CSW01_02835 only