Conservation of cofitness between CSW01_00370 and CSW01_01945 in Vibrio cholerae E7946 ATCC 55056

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00370 LysR family transcriptional regulator 1.0 CSW01_01945 DUF481 domain-containing protein 0.47 7
Shewanella loihica PV-4 0.44 Shew_3589 LysR family transcriptional regulator (RefSeq) 0.19 Shew_3285 hypothetical protein (RefSeq) low > 60
Shewanella sp. ANA-3 0.42 Shewana3_3949 LysR family transcriptional regulator (RefSeq) 0.17 Shewana3_0700 hypothetical protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.42 SO4556 transcriptional regulator, LysR family (NCBI ptt file) 0.13 SO3931 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.41 Sama_3449 regulatory protein, LysR (RefSeq) 0.15 Sama_3065 putative salt-induced outer membrane protein (RefSeq) low > 62
Escherichia coli BW25113 0.23 b3711 yidZ predicted DNA-binding transcriptional regulator (NCBI) 0.11 b1722 ydiY hypothetical protein (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.22 OHPLBJKB_04342 HTH-type transcriptional regulator YidZ 0.11 OHPLBJKB_02011 hypothetical protein low > 74
Escherichia coli BL21 0.22 ECD_03595 putative DNA-binding transcriptional regulator 0.11 ECD_01691 acid-inducible putative outer membrane protein low > 61
Escherichia fergusonii Becca 0.22 EFB2_04921 HTH-type transcriptional regulator YidZ 0.11 EFB2_02270 hypothetical protein low > 86
Escherichia coli ECOR38 0.22 HEPCGN_13655 yidZ HTH-type transcriptional regulator YidZ 0.11 HEPCGN_05405 ydiY Uncharacterized protein YdiY low > 88
Escherichia coli Nissle 1917 0.22 ECOLIN_RS21370 HTH-type transcriptional regulator YidZ 0.11 ECOLIN_RS09615 YdiY family protein — —
Escherichia coli ECRC102 0.22 NIAGMN_12705 yidZ HTH-type transcriptional regulator YidZ 0.11 NIAGMN_01025 ydiY Uncharacterized protein YdiY low > 80
Escherichia coli ECOR27 0.22 NOLOHH_07100 yidZ HTH-type transcriptional regulator YidZ 0.11 NOLOHH_17560 ydiY Uncharacterized protein YdiY low > 76
Escherichia coli ECRC98 0.22 JDDGAC_18570 yidZ HTH-type transcriptional regulator YidZ 0.11 JDDGAC_01615 ydiY Uncharacterized protein YdiY low > 87
Escherichia coli ECRC99 0.22 KEDOAH_13200 yidZ HTH-type transcriptional regulator YidZ 0.11 KEDOAH_01070 ydiY Uncharacterized protein YdiY — —
Escherichia coli ECRC62 0.22 BNILDI_04430 yidZ HTH-type transcriptional regulator YidZ 0.11 BNILDI_16345 ydiY Uncharacterized protein YdiY low > 75
Escherichia coli ECRC100 0.22 OKFHMN_14950 yidZ HTH-type transcriptional regulator YidZ 0.11 OKFHMN_27040 ydiY Uncharacterized protein YdiY low > 79
Escherichia coli ECRC101 0.22 MCAODC_05460 yidZ HTH-type transcriptional regulator YidZ 0.11 MCAODC_18370 ydiY Uncharacterized protein YdiY low > 88
Enterobacter sp. TBS_079 0.22 MPMX20_04648 HTH-type transcriptional regulator YidZ 0.12 MPMX20_01892 hypothetical protein low > 85
Enterobacter asburiae PDN3 0.22 EX28DRAFT_3995 Transcriptional regulator 0.12 EX28DRAFT_1727 Putative salt-induced outer membrane protein low > 76
Klebsiella pneumoniae MKP103 0.22 KDGMDA_08715 HTH-type transcriptional regulator YidZ 0.11 KDGMDA_24400 DUF481 domain-containing protein low > 95
Rahnella sp. WP5 0.21 EX31_RS00910 LysR family transcriptional regulator 0.10 EX31_RS10465 DUF481 domain-containing protein low > 89
Klebsiella michiganensis M5al 0.19 BWI76_RS00095 DNA-binding transcriptional regulator 0.12 BWI76_RS17170 membrane protein low > 92
Dyella japonica UNC79MFTsu3.2 0.17 ABZR86_RS07360 LysR family transcriptional regulator 0.14 ABZR86_RS14835 YdiY family protein 0.31 60

Not shown: 21 genomes with orthologs for CSW01_00370 only; 12 genomes with orthologs for CSW01_01945 only