Conservation of cofitness between CSW01_09855 and CSW01_01830 in Vibrio cholerae E7946 ATCC 55056

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_09855 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 1.0 CSW01_01830 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.62 7
Dickeya dianthicola 67-19 0.39 HGI48_RS05965 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 0.69 HGI48_RS18550 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 71
Pectobacterium carotovorum WPP14 0.39 HER17_RS15550 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 0.71 HER17_RS02580 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 75
Dickeya dianthicola ME23 0.38 DZA65_RS06300 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 0.69 DZA65_RS19685 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 75
Dickeya dadantii 3937 0.37 DDA3937_RS05920 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 0.70 DDA3937_RS18615 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 74
Serratia liquefaciens MT49 0.36 IAI46_17555 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 0.70 IAI46_01620 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 86
Rahnella sp. WP5 0.36 EX31_RS19350 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 0.70 EX31_RS08825 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.35 GFF1869 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate synthase (EC 4.2.99.20) 0.71 GFF824 tRNA dimethylallyltransferase (EC 2.5.1.75) low > 78
Klebsiella pneumoniae MKP103 0.35 KDGMDA_26985 2-succinyl-6-hydroxy-2 4-cyclohexadiene-1-carboxylate synthase 0.73 KDGMDA_11030 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 95
Escherichia coli ECRC62 0.35 BNILDI_13480 menH 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxy late synthase 0.72 BNILDI_06965 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 75
Escherichia coli ECOR27 0.35 NOLOHH_14565 menH 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxy late synthase 0.72 NOLOHH_04525 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 76
Escherichia coli ECRC102 0.35 NIAGMN_20710 menH 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxy late synthase 0.71 NIAGMN_10110 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.35 OHPLBJKB_01447 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 0.72 OHPLBJKB_03871 tRNA dimethylallyltransferase
Escherichia coli ECRC101 0.35 MCAODC_13980 menH 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxy late synthase 0.71 MCAODC_02775 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 88
Escherichia coli ECRC100 0.35 OKFHMN_22940 menH 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxy late synthase 0.71 OKFHMN_12260 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 79
Escherichia coli ECRC99 0.35 KEDOAH_05255 menH 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxy late synthase 0.71 KEDOAH_15895 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
Escherichia coli ECRC98 0.35 JDDGAC_26905 menH 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxy late synthase 0.71 JDDGAC_15900 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 87
Escherichia coli BL21 0.34 ECD_02190 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 0.72 ECD_04038 delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase low > 61
Escherichia coli BW25113 0.34 b2263 yfbB predicted peptidase (NCBI) 0.72 b4171 miaA tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) low > 76
Escherichia fergusonii Becca 0.34 EFB2_01592 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 0.71 EFB2_04364 tRNA dimethylallyltransferase low > 86
Escherichia coli ECOR38 0.34 HEPCGN_22155 menH 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxy late synthase 0.72 HEPCGN_10490 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 88
Escherichia coli Nissle 1917 0.34 ECOLIN_RS13180 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 0.71 ECOLIN_RS24225 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
Erwinia tracheiphila HP pepo 2.2 0.33 IJEDHG_18175 menH 2-succinyl-6-hydroxy-2 4-cyclohexadiene-1-carboxylate synthase 0.67 IJEDHG_06870 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
Erwinia tracheiphila SCR3 0.33 LU632_RS08110 menH 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 0.68 LU632_RS02050 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 74
Klebsiella michiganensis M5al 0.32 BWI76_RS20070 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 0.73 BWI76_RS02530 tRNA dimethylallyltransferase
Enterobacter sp. TBS_079 0.32 MPMX20_03199 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 0.71 MPMX20_00452 tRNA dimethylallyltransferase low > 85
Enterobacter asburiae PDN3 0.32 EX28DRAFT_0341 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 0.71 EX28DRAFT_3368 tRNA dimethylallyltransferase low > 76
Shewanella loihica PV-4 0.26 Shew_3600 alpha/beta hydrolase fold (RefSeq) 0.63 Shew_0565 tRNA delta(2)-isopentenylpyrophosphate transferase (RefSeq) low > 60
Shewanella oneidensis MR-1 0.26 SO4574 hydrolase, alpha/beta fold family (NCBI ptt file) 0.65 SO0602 miaA tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.25 Sama_3461 alpha/beta fold family hydrolase (RefSeq) 0.62 Sama_3026 miaA tRNA delta(2)-isopentenylpyrophosphate transferase (RefSeq)
Shewanella sp. ANA-3 0.25 Shewana3_3966 alpha/beta hydrolase fold (RefSeq) 0.63 Shewana3_0596 miaA tRNA delta(2)-isopentenylpyrophosphate transferase (RefSeq)

Not shown: 0 genomes with orthologs for CSW01_09855 only; 87 genomes with orthologs for CSW01_01830 only