Conservation of cofitness between CSW01_01875 and CSW01_01555 in Vibrio cholerae E7946 ATCC 55056

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01875 hypothetical protein 1.0 CSW01_01555 ATP-dependent RNA helicase RhlB 0.84 16
Rahnella sp. WP5 0.66 EX31_RS04470 transcriptional regulator 0.71 EX31_RS15040 ATP-dependent RNA helicase RhlB low > 89
Serratia liquefaciens MT49 0.66 IAI46_23490 transcriptional regulator 0.71 IAI46_00575 ATP-dependent RNA helicase RhlB low > 87
Dickeya dianthicola ME23 0.66 DZA65_RS20560 transcriptional regulator 0.70 DZA65_RS21270 ATP-dependent RNA helicase RhlB low > 75
Dickeya dianthicola 67-19 0.66 HGI48_RS19440 transcriptional regulator 0.70 HGI48_RS20225 ATP-dependent RNA helicase RhlB 0.76 15
Erwinia tracheiphila HP pepo 2.2 0.66 IJEDHG_12210 Uncharacterized protein YheO 0.71 IJEDHG_08915 rhlB ATP-dependent RNA helicase RhlB — —
Dickeya dadantii 3937 0.66 DDA3937_RS19340 transcriptional regulator 0.70 DDA3937_RS20080 ATP-dependent RNA helicase RhlB 0.39 18
Erwinia tracheiphila SCR3 0.66 LU632_RS22710 transcriptional regulator 0.71 LU632_RS24265 rhlB ATP-dependent RNA helicase RhlB low > 73
Erwinia amylovora T8 0.66 OLJFJH_03930 Uncharacterized protein YheO 0.71 OLJFJH_06265 ATP-dependent RNA helicase RhlB low > 58
Pectobacterium carotovorum WPP14 0.65 HER17_RS02010 transcriptional regulator 0.71 HER17_RS01130 ATP-dependent RNA helicase RhlB low > 75
Pantoea agglomerans CFBP13505 P0401 0.65 PagCFBP13505_RS21525 transcriptional regulator 0.73 PagCFBP13505_RS15530 ATP-dependent RNA helicase RhlB low > 74
Pantoea sp. MT58 0.65 IAI47_02055 transcriptional regulator 0.73 IAI47_18535 ATP-dependent RNA helicase RhlB low > 76
Escherichia coli ECOR38 0.64 HEPCGN_16130 yheO Uncharacterized protein YheO 0.72 HEPCGN_13310 rhlB ATP-dependent RNA helicase RhlB low > 88
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.64 GFF3726 YheO-like PAS domain 0.72 GFF2892 ATP-dependent RNA helicase RhlB low > 78
Escherichia coli ECRC62 0.64 BNILDI_02420 yheO Uncharacterized protein YheO 0.72 BNILDI_04790 rhlB ATP-dependent RNA helicase RhlB low > 75
Escherichia coli Nissle 1917 0.64 ECOLIN_RS19165 transcriptional regulator 0.72 ECOLIN_RS21700 ATP-dependent RNA helicase RhlB 0.61 2
Escherichia coli BL21 0.64 ECD_03197 putative PAS domain-containing DNA-binding transcriptional regulator 0.72 ECD_03658 ATP-dependent RNA helicase low > 61
Klebsiella pneumoniae MKP103 0.64 KDGMDA_06760 Uncharacterized protein YheO 0.72 KDGMDA_09545 ATP-dependent RNA helicase RhlB low > 95
Escherichia coli ECRC98 0.64 JDDGAC_20930 yheO Uncharacterized protein YheO 0.72 JDDGAC_18220 rhlB ATP-dependent RNA helicase RhlB low > 87
Escherichia coli ECOR27 0.64 NOLOHH_09100 yheO Uncharacterized protein YheO 0.72 NOLOHH_06735 rhlB ATP-dependent RNA helicase RhlB low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.64 OHPLBJKB_00357 Transcriptional regulator DauR 0.72 OHPLBJKB_04274 ATP-dependent RNA helicase RhlB low > 74
Escherichia coli BW25113 0.64 b3346 yheO orf, hypothetical protein (VIMSS) 0.72 b3780 rhlB ATP-dependent RNA helicase (NCBI) low > 76
Escherichia coli ECRC100 0.64 OKFHMN_17300 yheO Uncharacterized protein YheO 0.72 OKFHMN_14600 rhlB ATP-dependent RNA helicase RhlB low > 79
Escherichia coli ECRC102 0.64 NIAGMN_15070 yheO Uncharacterized protein YheO 0.72 NIAGMN_12355 rhlB ATP-dependent RNA helicase RhlB low > 80
Escherichia coli ECRC101 0.64 MCAODC_07830 yheO Uncharacterized protein YheO 0.72 MCAODC_05105 rhlB ATP-dependent RNA helicase RhlB low > 87
Escherichia coli ECRC99 0.64 KEDOAH_10840 yheO Uncharacterized protein YheO 0.72 KEDOAH_13550 rhlB ATP-dependent RNA helicase RhlB — —
Escherichia fergusonii Becca 0.64 EFB2_00477 Transcriptional regulator DauR 0.72 EFB2_04858 ATP-dependent RNA helicase RhlB low > 86
Klebsiella michiganensis M5al 0.64 BWI76_RS25905 hypothetical protein 0.71 BWI76_RS01065 ATP-dependent RNA helicase RhlB low > 92
Enterobacter sp. TBS_079 0.64 MPMX20_04239 Transcriptional regulator DauR 0.71 MPMX20_04492 ATP-dependent RNA helicase RhlB low > 85
Enterobacter asburiae PDN3 0.64 EX28DRAFT_4184 Uncharacterized protein conserved in bacteria 0.72 EX28DRAFT_4451 Superfamily II DNA and RNA helicases low > 76
Shewanella sp. ANA-3 0.35 Shewana3_2973 YheO domain-containing protein (RefSeq) 0.65 Shewana3_0410 ATP-dependent RNA helicase RhlB (RefSeq) low > 73
Shewanella oneidensis MR-1 0.35 SO1402 conserved hypothetical protein (NCBI ptt file) 0.66 SO0407 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) low > 76
Acinetobacter baumannii LAC-4 0.18 RR41_RS05440 PAS domain-containing protein 0.37 RR41_RS06305 ATP-dependent RNA helicase RhlB low > 55
Pseudomonas putida KT2440 0.16 PP_2931 conserved protein of unknown function 0.35 PP_1295 ATP-dependent RNA helicase RhlB low > 96
Pseudomonas fluorescens FW300-N1B4 0.15 Pf1N1B4_923 YheO-like PAS domain 0.35 Pf1N1B4_920 ATP-dependent RNA helicase RhlB low > 87
Pseudomonas sp. SVBP6 0.15 COO64_RS25095 transcriptional regulator 0.36 COO64_RS11685 rhlB ATP-dependent RNA helicase RhlB low > 93
Pseudomonas sp. S08-1 0.14 OH686_07030 YheO-like PAS domain 0.35 OH686_17780 ATP-dependent RNA helicase RhlB low > 80

Not shown: 30 genomes with orthologs for CSW01_01875 only; 7 genomes with orthologs for CSW01_01555 only