Conservation of cofitness between CSW01_00530 and CSW01_00240 in Vibrio cholerae E7946 ATCC 55056

16 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00530 rhomboid family intramembrane serine protease GlpG 1.0 CSW01_00240 LysM peptidoglycan-binding domain-containing protein 0.40 19
Shewanella oneidensis MR-1 0.40 SO4671 glpG glpG protein (NCBI ptt file) 0.22 SO0033 LysM domain protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.40 Shewana3_4107 rhomboid family protein (RefSeq) 0.22 Shewana3_0036 peptidoglycan-binding LysM (RefSeq) low > 73
Shewanella amazonensis SB2B 0.39 Sama_0095 glpG protein (RefSeq) 0.22 Sama_0044 LysM domain-containing protein (RefSeq) low > 62
Shewanella loihica PV-4 0.37 Shew_3712 rhomboid family protein (RefSeq) 0.24 Shew_3735 peptidoglycan-binding LysM (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.28 MIT1002_00066 Rhomboid protease GlpG 0.16 MIT1002_00021 LysM domain/BON superfamily protein low > 70
Marinobacter adhaerens HP15 0.18 HP15_1062 rhomboid family protein 0.22 HP15_3745 protein containing LysM domain low > 73
Pseudomonas sp. DMC3 0.18 GFF1034 Rhomboid protease GlpG 0.19 GFF593 hypothetical protein low > 89
Pseudomonas segetis P6 0.15 ACVTMO_RS15085 rhomboid family intramembrane serine protease 0.20 ACVTMO_RS01360 LysM peptidoglycan-binding domain-containing protein low > 75
Pseudomonas syringae pv. syringae B728a 0.15 Psyr_1687 Rhomboid-like protein 0.19 Psyr_0020 Peptidoglycan-binding LysM low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.15 Psyr_1687 Rhomboid-like protein 0.19 Psyr_0020 Peptidoglycan-binding LysM low > 86
Pseudomonas aeruginosa MRSN321 0.15 DY961_RS01510 rhomboid family intramembrane serine protease 0.22 DY961_RS26300 LysM peptidoglycan-binding domain-containing protein low > 100
Pseudomonas aeruginosa PUPa3 0.15 DQ20_RS34045 rhomboid family intramembrane serine protease 0.21 DQ20_RS58705 LysM peptidoglycan-binding domain-containing protein low > 101
Pseudomonas aeruginosa PA14 0.15 IKLFDK_15690 rhomboid family intramembrane serine protease 0.22 IKLFDK_25460 peptidoglycan-binding protein low > 98
Pseudomonas fluorescens FW300-N2E3 0.14 AO353_23615 peptidase S54 0.20 AO353_10645 peptidoglycan-binding protein low > 101
Pseudomonas sp. RS175 0.14 PFR28_01571 Rhomboid protease GlpG 0.19 PFR28_04660 hypothetical protein low > 88
Pseudomonas stutzeri RCH2 0.13 Psest_1919 Uncharacterized membrane protein (homolog of Drosophila rhomboid) 0.21 Psest_0024 LysM domain. low > 67

Not shown: 31 genomes with orthologs for CSW01_00530 only; 22 genomes with orthologs for CSW01_00240 only