Conservation of cofitness between CSW01_05935 and CSW01_00015 in Vibrio cholerae E7946 ATCC 55056

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_05935 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase 1.0 CSW01_00015 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.82 13
Serratia liquefaciens MT49 0.60 IAI46_14035 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF 0.75 IAI46_25250 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 86
Dickeya dadantii 3937 0.59 DDA3937_RS10470 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF 0.76 DDA3937_RS21310 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.59 GFF2724 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) 0.76 GFF1750 GTPase and tRNA-U34 5-formylation enzyme TrmE low > 78
Rahnella sp. WP5 0.58 EX31_RS09970 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF 0.75 EX31_RS06000 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 89
Escherichia coli ECRC62 0.58 BNILDI_18470 trpD bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD 0.76 BNILDI_04405 tRNA modification GTPase MnmE low > 75
Escherichia coli ECOR27 0.58 NOLOHH_20325 trpD bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD 0.76 NOLOHH_07125 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 75
Escherichia coli Nissle 1917 0.58 ECOLIN_RS07605 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF 0.76 ECOLIN_RS21345 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 55
Erwinia tracheiphila SCR3 0.58 LU632_RS12765 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF 0.73 LU632_RS25300 mnmE tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Escherichia coli ECOR38 0.58 HEPCGN_25525 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF 0.76 HEPCGN_13680 tRNA modification GTPase MnmE low > 87
Dickeya dianthicola 67-19 0.58 HGI48_RS10470 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF 0.75 HGI48_RS21710 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 71
Pantoea sp. MT58 0.58 IAI47_09175 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF 0.73 IAI47_18830 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 76
Dickeya dianthicola ME23 0.58 DZA65_RS10950 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF 0.75 DZA65_RS22695 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 75
Escherichia coli BL21 0.58 ECD_01236 indole-3-glycerolphosphate synthetase and N-(5-phosphoribosyl)anthranilate isomerase 0.76 ECD_03590 tRNA U34 5-methylaminomethyl-2-thiouridine modification GTPase low > 61
Escherichia fergusonii Becca 0.58 EFB2_02664 Tryptophan biosynthesis protein TrpCF 0.76 EFB2_04925 tRNA modification GTPase MnmE low > 86
Escherichia coli BW25113 0.58 b1262 trpC N-(5-phosphoribosyl)anthranilate isomerase and indole-3-glycerolphosphate synthetase (VIMSS) 0.76 b3706 trmE tRNA modification GTPase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.58 OHPLBJKB_02421 Tryptophan biosynthesis protein TrpCF 0.76 OHPLBJKB_04346 tRNA modification GTPase MnmE — —
Enterobacter sp. TBS_079 0.58 MPMX20_02512 Tryptophan biosynthesis protein TrpCF 0.75 MPMX20_04650 tRNA modification GTPase MnmE low > 85
Klebsiella michiganensis M5al 0.58 BWI76_RS11850 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase 0.77 BWI76_RS00050 tRNA modification GTPase — —
Escherichia coli ECRC101 0.57 MCAODC_15600 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF 0.76 MCAODC_05495 tRNA modification GTPase MnmE — —
Escherichia coli ECRC100 0.57 OKFHMN_02665 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF 0.76 OKFHMN_14985 tRNA modification GTPase MnmE — —
Escherichia coli ECRC99 0.57 KEDOAH_26085 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF 0.76 KEDOAH_13165 tRNA modification GTPase MnmE — —
Escherichia coli ECRC102 0.57 NIAGMN_26835 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF 0.76 NIAGMN_12740 tRNA modification GTPase MnmE — —
Erwinia amylovora T8 0.57 OLJFJH_13480 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF 0.74 OLJFJH_05190 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Escherichia coli ECRC98 0.57 JDDGAC_05210 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF 0.76 JDDGAC_18605 tRNA modification GTPase MnmE — —
Enterobacter asburiae PDN3 0.57 EX28DRAFT_0934 indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.75 EX28DRAFT_3993 tRNA modification GTPase TrmE — —
Pectobacterium carotovorum WPP14 0.57 HER17_RS10930 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF 0.75 HER17_RS21825 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 75
Alteromonas macleodii MIT1002 0.52 MIT1002_01427 Tryptophan biosynthesis protein TrpCF 0.67 MIT1002_04128 tRNA modification GTPase MnmE — —
Shewanella amazonensis SB2B 0.50 Sama_2132 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase (RefSeq) 0.75 Sama_0008 trmE tRNA modification GTPase TrmE (RefSeq) — —
Shewanella loihica PV-4 0.49 Shew_2254 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase (RefSeq) 0.73 Shew_3865 trmE tRNA modification GTPase TrmE (RefSeq) — —
Shewanella sp. ANA-3 0.43 Shewana3_1517 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase (RefSeq) 0.75 Shewana3_0005 trmE tRNA modification GTPase TrmE (RefSeq) low > 73
Shewanella oneidensis MR-1 0.41 SO3022 trpC/F indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase (NCBI ptt file) 0.75 SO0003 trmE tRNA modification GTPase TrmE (NCBI ptt file) low > 76
Kangiella aquimarina DSM 16071 0.36 B158DRAFT_2428 indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.63 B158DRAFT_0373 tRNA modification GTPase TrmE low > 40

Not shown: 0 genomes with orthologs for CSW01_05935 only; 77 genomes with orthologs for CSW01_00015 only