Conservation of cofitness between CSW01_00510 and CSW01_00015 in Vibrio cholerae E7946 ATCC 55056

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00510 chorismate lyase 1.0 CSW01_00015 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.82 5
Rahnella sp. WP5 0.30 EX31_RS11825 chorismate lyase 0.75 EX31_RS06000 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 89
Pantoea sp. MT58 0.30 IAI47_17910 chorismate lyase 0.73 IAI47_18830 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 76
Dickeya dianthicola ME23 0.30 DZA65_RS02870 chorismate lyase 0.75 DZA65_RS22695 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.37 44
Dickeya dianthicola 67-19 0.30 HGI48_RS02715 chorismate lyase 0.75 HGI48_RS21710 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 71
Dickeya dadantii 3937 0.30 DDA3937_RS02740 chorismate lyase 0.76 DDA3937_RS21310 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 74
Serratia liquefaciens MT49 0.29 IAI46_23025 chorismate lyase 0.75 IAI46_25250 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 86
Erwinia amylovora T8 0.26 OLJFJH_03600 chorismate lyase 0.74 OLJFJH_05190 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Enterobacter sp. TBS_079 0.24 MPMX20_00255 Chorismate pyruvate-lyase 0.75 MPMX20_04650 tRNA modification GTPase MnmE low > 85
Escherichia coli BW25113 0.24 b4039 ubiC chorismate lyase (VIMSS) 0.76 b3706 trmE tRNA modification GTPase (NCBI) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.24 GFF1408 Chorismate--pyruvate lyase (EC 4.1.3.40) 0.76 GFF1750 GTPase and tRNA-U34 5-formylation enzyme TrmE low > 78
Escherichia fergusonii Becca 0.24 EFB2_04564 Chorismate pyruvate-lyase 0.76 EFB2_04925 tRNA modification GTPase MnmE low > 86
Escherichia coli ECRC101 0.24 MCAODC_03585 ubiC chorismate lyase 0.76 MCAODC_05495 tRNA modification GTPase MnmE — —
Escherichia coli ECRC102 0.24 NIAGMN_10835 ubiC chorismate lyase 0.76 NIAGMN_12740 tRNA modification GTPase MnmE — —
Escherichia coli ECRC62 0.24 BNILDI_06280 ubiC chorismate lyase 0.76 BNILDI_04405 tRNA modification GTPase MnmE low > 75
Escherichia coli ECRC98 0.24 JDDGAC_16710 ubiC chorismate lyase 0.76 JDDGAC_18605 tRNA modification GTPase MnmE — —
Escherichia coli ECOR27 0.24 NOLOHH_05240 ubiC chorismate lyase 0.76 NOLOHH_07125 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 75
Escherichia coli ECOR38 0.24 HEPCGN_11605 ubiC chorismate lyase 0.76 HEPCGN_13680 tRNA modification GTPase MnmE low > 87
Escherichia coli ECRC99 0.24 KEDOAH_15075 ubiC chorismate lyase 0.76 KEDOAH_13165 tRNA modification GTPase MnmE — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.24 OHPLBJKB_04004 Chorismate pyruvate-lyase 0.76 OHPLBJKB_04346 tRNA modification GTPase MnmE — —
Escherichia coli Nissle 1917 0.24 ECOLIN_RS23315 chorismate lyase 0.76 ECOLIN_RS21345 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 55
Escherichia coli BL21 0.24 ECD_03911 chorismate--pyruvate lyase 0.76 ECD_03590 tRNA U34 5-methylaminomethyl-2-thiouridine modification GTPase low > 61
Escherichia coli ECRC100 0.24 OKFHMN_13085 ubiC chorismate lyase 0.76 OKFHMN_14985 tRNA modification GTPase MnmE — —
Alteromonas macleodii MIT1002 0.23 MIT1002_00068 Chorismate--pyruvate lyase 0.67 MIT1002_04128 tRNA modification GTPase MnmE — —
Kangiella aquimarina DSM 16071 0.20 B158DRAFT_0276 chorismate lyase (EC 4.1.3.40) 0.63 B158DRAFT_0373 tRNA modification GTPase TrmE low > 40
Pseudomonas sp. SVBP6 0.17 COO64_RS01655 chorismate lyase 0.63 COO64_RS02085 mnmE tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Shewanella loihica PV-4 0.17 Shew_3743 chorismate lyase (RefSeq) 0.73 Shew_3865 trmE tRNA modification GTPase TrmE (RefSeq) — —
Shewanella oneidensis MR-1 0.17 SO0131 hypothetical chorismate pyruvate lyase (NCBI ptt file) 0.75 SO0003 trmE tRNA modification GTPase TrmE (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.16 Shewana3_0125 chorismate lyase (RefSeq) 0.75 Shewana3_0005 trmE tRNA modification GTPase TrmE (RefSeq) low > 73
Shewanella amazonensis SB2B 0.16 Sama_3623 putative chorismate--pyruvate lyase (RefSeq) 0.75 Sama_0008 trmE tRNA modification GTPase TrmE (RefSeq) — —
Pseudomonas aeruginosa PA14 0.16 IKLFDK_26670 putative chorismate pyruvate-lyase 0.66 IKLFDK_25575 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 101

Not shown: 0 genomes with orthologs for CSW01_00510 only; 79 genomes with orthologs for CSW01_00015 only