Conservation of cofitness between BWI76_RS06530 and BWI76_RS25505 in Klebsiella michiganensis M5al

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Klebsiella michiganensis M5al 1.0 BWI76_RS06530 ATP-dependent Clp protease ATP-binding subunit ClpX 1.0 BWI76_RS25505 RNase E specificity factor CsrD 0.51 5
Escherichia coli ECRC98 0.98 JDDGAC_11985 clpX ATP-dependent protease ATP-binding subunit ClpX 0.77 JDDGAC_21345 csrD RNase E specificity factor CsrD low > 86
Escherichia coli ECRC62 0.98 BNILDI_22680 clpX ATP-dependent protease ATP-binding subunit ClpX 0.76 BNILDI_02015 csrD RNase E specificity factor CsrD low > 75
Escherichia fergusonii Becca 0.98 EFB2_03619 ATP-dependent Clp protease ATP-binding subunit ClpX 0.76 EFB2_00579 RNase E specificity factor CsrD low > 86
Escherichia coli ECRC99 0.98 KEDOAH_19635 clpX ATP-dependent protease ATP-binding subunit ClpX 0.77 KEDOAH_10430 csrD RNase E specificity factor CsrD — —
Escherichia coli Nissle 1917 0.98 ECOLIN_RS02630 ATP-dependent protease ATP-binding subunit ClpX 0.76 ECOLIN_RS18635 RNase E specificity factor CsrD low > 55
Escherichia coli BW25113 0.98 b0438 clpX ATP-dependent protease ATP-binding subunit (NCBI) 0.76 b3252 yhdA conserved inner membrane protein (NCBI) 0.41 28
Escherichia coli ECOR38 0.98 HEPCGN_06945 clpX ATP-dependent protease ATP-binding subunit ClpX 0.76 HEPCGN_16585 csrD RNase E specificity factor CsrD low > 87
Escherichia coli ECRC100 0.98 OKFHMN_08330 clpX ATP-dependent protease ATP-binding subunit ClpX 0.77 OKFHMN_17720 csrD RNase E specificity factor CsrD — —
Escherichia coli ECRC102 0.98 NIAGMN_06385 clpX ATP-dependent protease ATP-binding subunit ClpX 0.77 NIAGMN_15480 csrD RNase E specificity factor CsrD — —
Escherichia coli ECOR27 0.98 NOLOHH_01265 clpX ATP-dependent protease ATP-binding subunit ClpX 0.77 NOLOHH_09505 csrD RNase E specificity factor CsrD — —
Escherichia coli BL21 0.98 ECD_00389 ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine protease 0.76 ECD_03111 targeting factor for csrBC sRNA degradation low > 61
Escherichia coli ECRC101 0.98 MCAODC_27555 clpX ATP-dependent protease ATP-binding subunit ClpX 0.77 MCAODC_08240 csrD RNase E specificity factor CsrD 0.71 18
Escherichia coli HS(pFamp)R (ATCC 700891) 0.98 OHPLBJKB_03235 ATP-dependent Clp protease ATP-binding subunit ClpX 0.76 OHPLBJKB_00453 RNase E specificity factor CsrD low > 73
Enterobacter sp. TBS_079 0.97 MPMX20_01029 ATP-dependent Clp protease ATP-binding subunit ClpX 0.79 MPMX20_04158 RNase E specificity factor CsrD low > 85
Enterobacter asburiae PDN3 0.97 EX28DRAFT_2533 endopeptidase Clp ATP-binding regulatory subunit (clpX) 0.79 EX28DRAFT_3302 diguanylate cyclase (GGDEF) domain — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.97 GFF4354 ATP-dependent Clp protease ATP-binding subunit ClpX 0.76 GFF2133 RNase E specificity factor CsrD low > 78
Pantoea sp. MT58 0.95 IAI47_14650 ATP-dependent protease ATP-binding subunit ClpX 0.49 IAI47_02430 RNase E specificity factor CsrD — —
Rahnella sp. WP5 0.95 EX31_RS22250 ATP-dependent protease ATP-binding subunit ClpX 0.48 EX31_RS12230 RNase E specificity factor CsrD low > 89
Erwinia tracheiphila SCR3 0.94 LU632_RS18340 clpX ATP-dependent protease ATP-binding subunit ClpX 0.50 LU632_RS21455 csrD RNase E specificity factor CsrD — —
Serratia liquefaciens MT49 0.94 IAI46_05015 ATP-dependent protease ATP-binding subunit ClpX 0.56 IAI46_22725 RNase E specificity factor CsrD low > 86
Pectobacterium carotovorum WPP14 0.93 HER17_RS15845 ATP-dependent protease ATP-binding subunit ClpX 0.52 HER17_RS20175 RNase E specificity factor CsrD — —
Dickeya dadantii 3937 0.93 DDA3937_RS05645 ATP-dependent protease ATP-binding subunit ClpX 0.50 DDA3937_RS01425 RNase E specificity factor CsrD low > 74
Dickeya dianthicola ME23 0.92 DZA65_RS06015 ATP-dependent protease ATP-binding subunit ClpX 0.51 DZA65_RS01405 RNase E specificity factor CsrD — —
Dickeya dianthicola 67-19 0.92 HGI48_RS05690 ATP-dependent protease ATP-binding subunit ClpX 0.50 HGI48_RS01345 RNase E specificity factor CsrD low > 71
Vibrio cholerae E7946 ATCC 55056 0.84 CSW01_09610 ATP-dependent Clp protease ATP-binding subunit ClpX 0.25 CSW01_02100 RNase E specificity factor CsrD — —
Shewanella sp. ANA-3 0.84 Shewana3_2660 clpX ATP-dependent protease ATP-binding subunit ClpX (RefSeq) 0.20 Shewana3_3668 regulatory protein CsrD (RefSeq) low > 73
Shewanella amazonensis SB2B 0.83 Sama_1225 clpX ATP-dependent protease ATP-binding subunit ClpX (RefSeq) 0.19 Sama_0449 regulatory protein CsrD (RefSeq) low > 62
Shewanella oneidensis MR-1 0.83 SO1795 clpX ATP-dependent Clp protease, ATP-binding subunit ClpX (NCBI ptt file) 0.21 SO4116 mshH MSHA biogenesis protein MshH (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.82 Shew_2507 clpX ATP-dependent protease ATP-binding subunit (RefSeq) 0.18 Shew_0384 regulatory protein CsrD (RefSeq) — —

Not shown: 71 genomes with orthologs for BWI76_RS06530 only; 0 genomes with orthologs for BWI76_RS25505 only