Conservation of cofitness between BWI76_RS00940 and BWI76_RS21350 in Klebsiella michiganensis M5al

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Klebsiella michiganensis M5al 1.0 BWI76_RS00940 transcriptional regulator HdfR 1.0 BWI76_RS21350 anti-RNA polymerase sigma factor SigE 0.32 11
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF2907 HTH-type transcriptional regulator hdfR 0.76 GFF2108 Sigma factor RpoE negative regulatory protein RseA — —
Escherichia coli BL21 0.83 ECD_03642 flhDC operon transcriptional repressor 0.77 ECD_02466 anti-sigma factor — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.83 OHPLBJKB_04288 HTH-type transcriptional regulator HdfR 0.76 OHPLBJKB_01135 Anti-sigma-E factor RseA low > 73
Escherichia coli BW25113 0.83 b4480 hdfR transcriptional regulator HdfR (NCBI) 0.77 b2572 rseA anti-sigma factor (NCBI) low > 76
Escherichia coli ECOR38 0.82 HEPCGN_13385 hdfR HTH-type transcriptional regulator HdfR 0.76 HEPCGN_20525 rseA anti-sigma-E factor RseA low > 87
Escherichia coli Nissle 1917 0.82 ECOLIN_RS21630 HTH-type transcriptional regulator HdfR 0.77 ECOLIN_RS14555 anti-sigma-E factor RseA low > 55
Escherichia fergusonii Becca 0.82 EFB2_04871 HTH-type transcriptional regulator HdfR 0.77 EFB2_01324 Anti-sigma-E factor RseA low > 86
Escherichia coli ECRC62 0.82 BNILDI_04715 hdfR HTH-type transcriptional regulator HdfR 0.77 BNILDI_11855 rseA anti-sigma-E factor RseA low > 75
Escherichia coli ECRC102 0.82 NIAGMN_12430 hdfR HTH-type transcriptional regulator HdfR 0.79 NIAGMN_19150 rseA anti-sigma-E factor RseA — —
Escherichia coli ECRC101 0.82 MCAODC_05180 hdfR HTH-type transcriptional regulator HdfR 0.79 MCAODC_11910 rseA anti-sigma-E factor RseA low > 87
Escherichia coli ECRC98 0.82 JDDGAC_18295 hdfR HTH-type transcriptional regulator HdfR 0.79 JDDGAC_25045 rseA anti-sigma-E factor RseA low > 86
Escherichia coli ECOR27 0.82 NOLOHH_06810 hdfR HTH-type transcriptional regulator HdfR 0.77 NOLOHH_13055 rseA anti-sigma-E factor RseA low > 75
Escherichia coli ECRC100 0.82 OKFHMN_14675 hdfR HTH-type transcriptional regulator HdfR 0.79 OKFHMN_21380 rseA anti-sigma-E factor RseA — —
Escherichia coli ECRC99 0.82 KEDOAH_13475 hdfR HTH-type transcriptional regulator HdfR 0.79 KEDOAH_06840 rseA anti-sigma-E factor RseA — —
Enterobacter sp. TBS_079 0.82 MPMX20_04505 HTH-type transcriptional regulator HdfR 0.79 MPMX20_03443 Anti-sigma-E factor RseA low > 85
Enterobacter asburiae PDN3 0.81 EX28DRAFT_4436 Transcriptional regulator 0.79 EX28DRAFT_0073 Negative regulator of sigma E activity low > 76
Pantoea sp. MT58 0.64 IAI47_01000 HTH-type transcriptional regulator HdfR 0.70 IAI47_04855 anti-sigma-E factor RseA low > 76
Erwinia tracheiphila SCR3 0.64 LU632_RS24450 hdfR HTH-type transcriptional regulator HdfR 0.67 LU632_RS15420 rseA anti-sigma-E factor RseA — —
Pectobacterium carotovorum WPP14 0.64 HER17_RS01040 HTH-type transcriptional regulator HdfR 0.58 HER17_RS05785 anti-sigma-E factor RseA — —
Serratia liquefaciens MT49 0.63 IAI46_24385 HTH-type transcriptional regulator HdfR 0.62 IAI46_19580 anti-sigma-E factor RseA low > 86
Dickeya dadantii 3937 0.62 DDA3937_RS20190 HTH-type transcriptional regulator HdfR 0.54 DDA3937_RS15760 anti-sigma-E factor RseA — —
Rahnella sp. WP5 0.62 EX31_RS14970 HTH-type transcriptional regulator HdfR 0.68 EX31_RS21805 anti-sigma-E factor RseA low > 89
Dickeya dianthicola ME23 0.62 DZA65_RS21375 HTH-type transcriptional regulator HdfR 0.52 DZA65_RS16925 anti-sigma-E factor RseA low > 75
Dickeya dianthicola 67-19 0.62 HGI48_RS20335 HTH-type transcriptional regulator HdfR 0.53 HGI48_RS15845 anti-sigma-E factor RseA — —
Shewanella oneidensis MR-1 0.33 SO2202 transcriptional regulator, LysR family (NCBI ptt file) 0.26 SO1343 rseA sigma-E factor negative regulatory protein (NCBI ptt file) 0.29 37
Shewanella sp. ANA-3 0.33 Shewana3_2403 LysR family transcriptional regulator (RefSeq) 0.25 Shewana3_3031 anti sigma-E protein, RseA (RefSeq) — —
Shewanella amazonensis SB2B 0.32 Sama_1997 LysR family transcriptional regulator (RefSeq) 0.23 Sama_0875 sigma-E factor negative regulatory protein (RefSeq) low > 62
Vibrio cholerae E7946 ATCC 55056 0.30 CSW01_19195 LysR family transcriptional regulator 0.35 CSW01_12480 sigma-E factor negative regulatory protein RseA low > 62
Shewanella loihica PV-4 0.26 Shew_2897 LysR family transcriptional regulator (RefSeq) 0.24 Shew_1049 anti sigma-E protein, RseA (RefSeq) — —

Not shown: 15 genomes with orthologs for BWI76_RS00940 only; 1 genomes with orthologs for BWI76_RS21350 only