Conservation of cofitness between BWI76_RS00940 and BWI76_RS17980 in Klebsiella michiganensis M5al

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Klebsiella michiganensis M5al 1.0 BWI76_RS00940 transcriptional regulator HdfR 1.0 BWI76_RS17980 RNA chaperone ProQ 0.33 8
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF2907 HTH-type transcriptional regulator hdfR 0.81 GFF2846 ProQ: influences osmotic activation of compatible solute ProP low > 78
Escherichia coli BW25113 0.83 b4480 hdfR transcriptional regulator HdfR (NCBI) 0.84 b1831 proQ putative solute/DNA competence effector (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.83 OHPLBJKB_04288 HTH-type transcriptional regulator HdfR 0.78 OHPLBJKB_01900 RNA chaperone ProQ 0.94 11
Escherichia coli BL21 0.83 ECD_03642 flhDC operon transcriptional repressor 0.78 ECD_01802 RNA chaperone, putative ProP translation regulator low > 61
Escherichia coli ECOR38 0.82 HEPCGN_13385 hdfR HTH-type transcriptional regulator HdfR 0.79 HEPCGN_04860 proQ RNA chaperone ProQ low > 87
Escherichia fergusonii Becca 0.82 EFB2_04871 HTH-type transcriptional regulator HdfR 0.79 EFB2_02170 RNA chaperone ProQ low > 86
Escherichia coli Nissle 1917 0.82 ECOLIN_RS21630 HTH-type transcriptional regulator HdfR 0.79 ECOLIN_RS10195 RNA chaperone ProQ low > 55
Escherichia coli ECRC62 0.82 BNILDI_04715 hdfR HTH-type transcriptional regulator HdfR 0.78 BNILDI_15765 proQ RNA chaperone ProQ low > 75
Escherichia coli ECOR27 0.82 NOLOHH_06810 hdfR HTH-type transcriptional regulator HdfR 0.78 NOLOHH_16970 proQ RNA chaperone ProQ low > 75
Escherichia coli ECRC98 0.82 JDDGAC_18295 hdfR HTH-type transcriptional regulator HdfR 0.79 JDDGAC_01035 proQ RNA chaperone ProQ low > 86
Escherichia coli ECRC101 0.82 MCAODC_05180 hdfR HTH-type transcriptional regulator HdfR 0.79 MCAODC_18945 proQ RNA chaperone ProQ low > 87
Escherichia coli ECRC102 0.82 NIAGMN_12430 hdfR HTH-type transcriptional regulator HdfR 0.79 NIAGMN_01600 proQ RNA chaperone ProQ — —
Escherichia coli ECRC100 0.82 OKFHMN_14675 hdfR HTH-type transcriptional regulator HdfR 0.79 OKFHMN_26460 proQ RNA chaperone ProQ low > 80
Escherichia coli ECRC99 0.82 KEDOAH_13475 hdfR HTH-type transcriptional regulator HdfR 0.79 KEDOAH_01645 proQ RNA chaperone ProQ — —
Enterobacter sp. TBS_079 0.82 MPMX20_04505 HTH-type transcriptional regulator HdfR 0.82 MPMX20_02738 RNA chaperone ProQ low > 85
Enterobacter asburiae PDN3 0.81 EX28DRAFT_4436 Transcriptional regulator 0.82 EX28DRAFT_0725 Activator of osmoprotectant transporter ProP low > 76
Pantoea sp. MT58 0.64 IAI47_01000 HTH-type transcriptional regulator HdfR 0.69 IAI47_08700 RNA chaperone ProQ 0.42 40
Pectobacterium carotovorum WPP14 0.64 HER17_RS01040 HTH-type transcriptional regulator HdfR 0.61 HER17_RS11695 RNA chaperone ProQ low > 75
Erwinia tracheiphila SCR3 0.64 LU632_RS24450 hdfR HTH-type transcriptional regulator HdfR 0.66 LU632_RS13255 proQ RNA chaperone ProQ low > 74
Serratia liquefaciens MT49 0.63 IAI46_24385 HTH-type transcriptional regulator HdfR 0.71 IAI46_10795 RNA chaperone ProQ 0.49 18
Dickeya dadantii 3937 0.62 DDA3937_RS20190 HTH-type transcriptional regulator HdfR 0.65 DDA3937_RS11970 RNA chaperone ProQ low > 74
Rahnella sp. WP5 0.62 EX31_RS14970 HTH-type transcriptional regulator HdfR 0.66 EX31_RS24875 RNA chaperone ProQ low > 89
Dickeya dianthicola 67-19 0.62 HGI48_RS20335 HTH-type transcriptional regulator HdfR 0.65 HGI48_RS12060 RNA chaperone ProQ low > 71
Dickeya dianthicola ME23 0.62 DZA65_RS21375 HTH-type transcriptional regulator HdfR 0.65 DZA65_RS12510 RNA chaperone ProQ — —
Shewanella oneidensis MR-1 0.33 SO2202 transcriptional regulator, LysR family (NCBI ptt file) 0.37 SO2602 hypothetical Activator of ProP osmoprotectant transporter (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.33 Shewana3_2403 LysR family transcriptional regulator (RefSeq) 0.34 Shewana3_1777 putative solute/DNA competence effector (RefSeq) low > 73
Shewanella amazonensis SB2B 0.32 Sama_1997 LysR family transcriptional regulator (RefSeq) 0.40 Sama_1584 putative solute/DNA competence effector (RefSeq) — —
Vibrio cholerae E7946 ATCC 55056 0.30 CSW01_19195 LysR family transcriptional regulator 0.49 CSW01_07520 RNA chaperone ProQ low > 62
Shewanella loihica PV-4 0.26 Shew_2897 LysR family transcriptional regulator (RefSeq) 0.37 Shew_1801 putative solute/DNA competence effector (RefSeq) low > 60

Not shown: 15 genomes with orthologs for BWI76_RS00940 only; 1 genomes with orthologs for BWI76_RS17980 only