Conservation of cofitness between BPHYT_RS08730 and BPHYT_RS32420 in Burkholderia phytofirmans PsJN

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS08730 hypothetical protein 1.0 BPHYT_RS32420 selenocysteine synthase 0.22 16
Paraburkholderia sabiae LMG 24235 0.91 QEN71_RS22640 DUF3820 family protein 0.68 QEN71_RS18435 L-seryl-tRNA(Sec) selenium transferase low > 153
Pseudomonas stutzeri RCH2 0.83 Psest_1458 Uncharacterized protein conserved in bacteria 0.53 Psest_4108 seryl-tRNA(sec) selenium transferase low > 67
Pseudomonas fluorescens FW300-N1B4 0.79 Pf1N1B4_583 FIG00957748: hypothetical protein 0.52 Pf1N1B4_4952 L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1) low > 87
Pseudomonas fluorescens FW300-N2E3 0.78 AO353_03335 hypothetical protein 0.54 AO353_24985 L-seryl-tRNA(Sec) selenium transferase low > 101
Pseudomonas fluorescens GW456-L13 0.78 PfGW456L13_1906 FIG00957748: hypothetical protein 0.51 PfGW456L13_3095 L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1) low > 87
Variovorax sp. SCN45 0.76 GFF5018 Uncharacterized protein YpeB 0.50 GFF5654 L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1) low > 127
Dyella japonica UNC79MFTsu3.2 0.74 ABZR86_RS01730 DUF3820 family protein 0.46 ABZR86_RS04530 L-seryl-tRNA(Sec) selenium transferase low > 74
Shewanella oneidensis MR-1 0.49 SO3326 conserved hypothetical protein (NCBI ptt file) 0.42 SO0105 selA L-seryl-tRNA selenium transferase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.48 Shewana3_1217 hypothetical protein (RefSeq) 0.42 Shewana3_0106 selenocysteine synthase (RefSeq) low > 73
Serratia liquefaciens MT49 0.45 IAI46_18425 DUF3820 family protein 0.44 IAI46_00240 L-seryl-tRNA(Sec) selenium transferase low > 86
Klebsiella michiganensis M5al 0.44 BWI76_RS20620 negative regulator 0.46 BWI76_RS27140 L-selenocysteinyl-tRNA(Sec) synthase — —
Enterobacter sp. TBS_079 0.44 MPMX20_03304 hypothetical protein 0.43 MPMX20_00140 L-seryl-tRNA(Sec) selenium transferase low > 85
Escherichia coli ECOR38 0.44 HEPCGN_21400 Putative quorum-sensing-regulated virulence factor 0.47 HEPCGN_14680 selA L-seryl-tRNA(Sec) selenium transferase low > 87
Escherichia coli Nissle 1917 0.44 ECOLIN_RS13850 DUF3820 family protein 0.47 ECOLIN_RS20515 L-seryl-tRNA(Sec) selenium transferase — —
Escherichia coli BW25113 0.44 b4546 ypeB hypothetical protein (NCBI) 0.46 b3591 selA selenocysteine synthase (NCBI) low > 76
Escherichia coli ECRC99 0.44 KEDOAH_06000 ypeB Uncharacterized protein YpeB 0.46 KEDOAH_12305 selA L-seryl-tRNA(Sec) selenium transferase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.44 OHPLBJKB_01313 hypothetical protein 0.46 OHPLBJKB_00112 L-seryl-tRNA(Sec) selenium transferase low > 73
Escherichia coli BL21 0.44 ECD_02310 DUF3820 family protein 0.46 ECD_03446 selenocysteine synthase low > 61
Escherichia coli ECRC102 0.44 NIAGMN_19990 ypeB Uncharacterized protein YpeB 0.46 NIAGMN_13605 selA L-seryl-tRNA(Sec) selenium transferase — —
Escherichia coli ECRC62 0.44 BNILDI_12765 ypeB Uncharacterized protein YpeB 0.46 BNILDI_03790 selA L-seryl-tRNA(Sec) selenium transferase low > 75
Escherichia coli ECRC98 0.44 JDDGAC_26170 ypeB Uncharacterized protein YpeB 0.46 JDDGAC_19475 selA L-seryl-tRNA(Sec) selenium transferase low > 86
Escherichia coli ECRC100 0.44 OKFHMN_22220 ypeB Uncharacterized protein YpeB 0.46 OKFHMN_15845 selA L-seryl-tRNA(Sec) selenium transferase low > 80
Escherichia coli ECOR27 0.44 NOLOHH_13900 ypeB Uncharacterized protein YpeB 0.46 NOLOHH_07740 selA L-seryl-tRNA(Sec) selenium transferase low > 75
Escherichia coli ECRC101 0.44 MCAODC_12750 ypeB Uncharacterized protein YpeB 0.46 MCAODC_06360 selA L-seryl-tRNA(Sec) selenium transferase low > 87
Escherichia fergusonii Becca 0.43 EFB2_01466 hypothetical protein 0.47 EFB2_00218 L-seryl-tRNA(Sec) selenium transferase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.42 GFF2040 FIG074102: hypothetical protein 0.46 GFF420 L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1) low > 78
Enterobacter asburiae PDN3 0.42 EX28DRAFT_0218 Uncharacterized protein conserved in bacteria 0.43 EX28DRAFT_3845 L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1) low > 76

Not shown: 33 genomes with orthologs for BPHYT_RS08730 only; 4 genomes with orthologs for BPHYT_RS32420 only