Conservation of cofitness between BPHYT_RS08730 and BPHYT_RS22040 in Burkholderia phytofirmans PsJN

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS08730 hypothetical protein 1.0 BPHYT_RS22040 peptide ABC transporter permease 0.22 19
Paraburkholderia bryophila 376MFSha3.1 0.97 H281DRAFT_00769 hypothetical protein 0.92 H281DRAFT_03127 oligopeptide transport system permease protein low > 103
Paraburkholderia graminis OAS925 0.97 ABIE53_001981 uncharacterized protein (DUF3820 family) 0.89 ABIE53_004171 oligopeptide transport system permease protein low > 113
Paraburkholderia sabiae LMG 24235 0.91 QEN71_RS22640 DUF3820 family protein 0.72 QEN71_RS18350 ABC transporter permease subunit low > 153
Pseudomonas fluorescens SBW25 0.76 PFLU_RS23705 DUF3820 family protein 0.30 PFLU_RS10925 ABC transporter permease low > 109
Variovorax sp. SCN45 0.76 GFF5018 Uncharacterized protein YpeB 0.32 GFF7019 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) low > 127
Pseudomonas fluorescens SBW25-INTG 0.76 PFLU_RS23705 DUF3820 family protein 0.30 PFLU_RS10925 ABC transporter permease low > 109
Vibrio cholerae E7946 ATCC 55056 0.48 CSW01_14815 hypothetical protein 0.54 CSW01_05555 oligopeptide ABC transporter permease OppC low > 62
Rahnella sp. WP5 0.47 EX31_RS20155 DUF3820 family protein 0.45 EX31_RS10055 oligopeptide ABC transporter permease OppC low > 89
Dickeya dianthicola 67-19 0.45 HGI48_RS17140 DUF3820 family protein 0.46 HGI48_RS10390 oligopeptide ABC transporter permease OppC low > 71
Serratia liquefaciens MT49 0.45 IAI46_18425 DUF3820 family protein 0.50 IAI46_14195 oligopeptide ABC transporter permease OppC low > 86
Klebsiella michiganensis M5al 0.44 BWI76_RS20620 negative regulator 0.47 BWI76_RS17230 peptide ABC transporter permease — —
Enterobacter sp. TBS_079 0.44 MPMX20_03304 hypothetical protein 0.49 MPMX20_02585 Oligopeptide transport system permease protein OppC low > 85
Escherichia coli ECOR38 0.44 HEPCGN_21400 Putative quorum-sensing-regulated virulence factor 0.46 HEPCGN_25105 oppC oligopeptide ABC transporter permease OppC low > 87
Escherichia coli Nissle 1917 0.44 ECOLIN_RS13850 DUF3820 family protein 0.46 ECOLIN_RS07520 oligopeptide ABC transporter permease OppC — —
Escherichia coli BW25113 0.44 b4546 ypeB hypothetical protein (NCBI) 0.46 b1245 oppC oligopeptide transporter subunit (NCBI) low > 76
Escherichia coli BL21 0.44 ECD_02310 DUF3820 family protein 0.46 ECD_01219 oligopeptide ABC transporter permease low > 61
Escherichia coli ECOR27 0.44 NOLOHH_13900 ypeB Uncharacterized protein YpeB 0.46 NOLOHH_20410 oppC oligopeptide ABC transporter permease OppC low > 75
Escherichia coli ECRC101 0.44 MCAODC_12750 ypeB Uncharacterized protein YpeB 0.46 MCAODC_21620 oppC oligopeptide ABC transporter permease OppC low > 87
Escherichia coli ECRC98 0.44 JDDGAC_26170 ypeB Uncharacterized protein YpeB 0.46 JDDGAC_05935 oppC oligopeptide ABC transporter permease OppC low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.44 OHPLBJKB_01313 hypothetical protein 0.46 OHPLBJKB_02438 Oligopeptide transport system permease protein OppC low > 73
Escherichia coli ECRC62 0.44 BNILDI_12765 ypeB Uncharacterized protein YpeB 0.46 BNILDI_18555 oppC oligopeptide ABC transporter permease OppC low > 75
Escherichia coli ECRC102 0.44 NIAGMN_19990 ypeB Uncharacterized protein YpeB 0.46 NIAGMN_27595 oppC oligopeptide ABC transporter permease OppC — —
Escherichia coli ECRC99 0.44 KEDOAH_06000 ypeB Uncharacterized protein YpeB 0.46 KEDOAH_25635 oppC oligopeptide ABC transporter permease OppC — —
Escherichia coli ECRC100 0.44 OKFHMN_22220 ypeB Uncharacterized protein YpeB 0.46 OKFHMN_28640 oppC oligopeptide ABC transporter permease OppC — —
Escherichia fergusonii Becca 0.43 EFB2_01466 hypothetical protein 0.46 EFB2_02680 Oligopeptide transport system permease protein OppC low > 86
Dickeya dianthicola ME23 0.43 DZA65_RS18225 hypothetical protein 0.46 DZA65_RS10870 oligopeptide ABC transporter permease OppC low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.42 GFF2040 FIG074102: hypothetical protein 0.48 GFF2744 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) low > 78
Pantoea sp. MT58 0.42 IAI47_05460 DUF3820 family protein 0.47 IAI47_09080 oligopeptide ABC transporter permease OppC low > 76
Enterobacter asburiae PDN3 0.42 EX28DRAFT_0218 Uncharacterized protein conserved in bacteria 0.49 EX28DRAFT_0870 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components low > 76
Pectobacterium carotovorum WPP14 0.40 HER17_RS04050 DUF3820 family protein 0.45 HER17_RS11010 oligopeptide ABC transporter permease OppC low > 75

Not shown: 30 genomes with orthologs for BPHYT_RS08730 only; 7 genomes with orthologs for BPHYT_RS22040 only