Conservation of cofitness between BPHYT_RS10945 and BPHYT_RS14840 in Burkholderia phytofirmans PsJN

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS10945 2-deoxy-D-gluconate 3-dehydrogenase 1.0 BPHYT_RS14840 lytic transglycosylase 0.40 1
Paraburkholderia bryophila 376MFSha3.1 0.89 H281DRAFT_01159 2-deoxy-D-gluconate 3-dehydrogenase 0.92 H281DRAFT_03910 membrane-bound lytic murein transglycosylase B low > 103
Paraburkholderia graminis OAS925 0.88 ABIE53_002285 2-deoxy-D-gluconate 3-dehydrogenase 0.89 ABIE53_003143 membrane-bound lytic murein transglycosylase B 0.18 44
Paraburkholderia sabiae LMG 24235 0.76 QEN71_RS37290 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD 0.80 QEN71_RS04140 lytic murein transglycosylase B low > 153
Ralstonia sp. UNC404CL21Col 0.75 ABZR87_RS20810 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD 0.51 ABZR87_RS09520 lytic murein transglycosylase B low > 80
Pantoea sp. MT58 0.71 IAI47_11020 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD 0.26 IAI47_04275 lytic murein transglycosylase B low > 76
Erwinia tracheiphila SCR3 0.71 LU632_RS00060 kduD 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD 0.25 LU632_RS15745 mltB lytic murein transglycosylase B low > 74
Klebsiella michiganensis M5al 0.69 BWI76_RS11775 2-deoxy-D-gluconate 3-dehydrogenase 0.27 BWI76_RS22210 murein transglycosylase B low > 92
Rahnella sp. WP5 0.69 EX31_RS14110 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD 0.25 EX31_RS07810 lytic murein transglycosylase B low > 89
Pectobacterium carotovorum WPP14 0.69 HER17_RS11410 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD 0.25 HER17_RS16185 lytic murein transglycosylase B low > 75
Dickeya dadantii 3937 0.68 DDA3937_RS11335 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD 0.25 DDA3937_RS03745 lytic murein transglycosylase B low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.68 GFF1327 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125) 0.26 GFF4695 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) low > 78
Dickeya dianthicola ME23 0.67 DZA65_RS11720 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD 0.25 DZA65_RS03910 lytic murein transglycosylase B low > 75
Dickeya dianthicola 67-19 0.67 HGI48_RS11375 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD 0.25 HGI48_RS03780 lytic murein transglycosylase B low > 71
Escherichia coli Nissle 1917 0.67 ECOLIN_RS15950 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD 0.27 ECOLIN_RS27170 lytic murein transglycosylase B — —
Escherichia fergusonii Becca 0.67 EFB2_01041 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase 0.26 EFB2_01223 Membrane-bound lytic murein transglycosylase B low > 86
Escherichia coli BW25113 0.67 b2842 kduD 2-deoxy-D-gluconate 3-dehydrogenase (NCBI) 0.26 b2701 mltB membrane-bound lytic murein transglycosylase B (NCBI) low > 76
Enterobacter asburiae PDN3 0.65 EX28DRAFT_2921 2-deoxy-D-gluconate 3-dehydrogenase 0.26 EX28DRAFT_2790 lytic murein transglycosylase B 0.65 32
Sphingomonas koreensis DSMZ 15582 0.65 Ga0059261_2966 2-deoxy-D-gluconate 3-dehydrogenase 0.14 Ga0059261_0120 lytic murein transglycosylase low > 68
Xanthomonas campestris pv. campestris strain 8004 0.60 Xcc-8004.207.1 hypothetical protein 0.23 Xcc-8004.904.1 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) — —
Escherichia coli BL21 0.43 ECD_02618 putative SDR family oxidoreductase 0.26 ECD_02551 membrane-bound lytic murein transglycosylase B low > 61

Not shown: 23 genomes with orthologs for BPHYT_RS10945 only; 31 genomes with orthologs for BPHYT_RS14840 only