Conservation of cofitness between BNILDI_11925 and BNILDI_13855 in Escherichia coli ECRC62

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC62 1.0 BNILDI_11925 yfhH MurR/RpiR family transcriptional regulator 1.0 BNILDI_13855 rsuA 16S rRNA pseudouridine(516) synthase RsuA 0.72 3
Escherichia coli ECRC98 1.00 JDDGAC_25115 yfhH MurR/RpiR family transcriptional regulator 1.00 JDDGAC_27320 rsuA 16S rRNA pseudouridine(516) synthase RsuA low > 86
Escherichia coli ECRC99 1.00 KEDOAH_06770 yfhH MurR/RpiR family transcriptional regulator 1.00 KEDOAH_04825 rsuA 16S rRNA pseudouridine(516) synthase RsuA — —
Escherichia coli ECRC102 1.00 NIAGMN_19220 yfhH MurR/RpiR family transcriptional regulator 1.00 NIAGMN_21125 rsuA 16S rRNA pseudouridine(516) synthase RsuA — —
Escherichia coli ECRC101 1.00 MCAODC_11980 yfhH MurR/RpiR family transcriptional regulator 1.00 MCAODC_14410 rsuA 16S rRNA pseudouridine(516) synthase RsuA low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01146 HTH-type transcriptional regulator MurR 1.00 OHPLBJKB_01526 Ribosomal small subunit pseudouridine synthase A low > 73
Escherichia coli ECRC100 1.00 OKFHMN_21450 yfhH MurR/RpiR family transcriptional regulator 1.00 OKFHMN_23360 rsuA 16S rRNA pseudouridine(516) synthase RsuA low > 80
Escherichia coli BL21 1.00 ECD_02455 putative DNA-binding transcriptional regulator 1.00 ECD_02113 16S rRNA pseudouridine(516) synthase low > 61
Escherichia coli BW25113 1.00 b2561 yfhH orf, hypothetical protein (VIMSS) 1.00 b2183 rsuA 16S rRNA pseudouridylate 516 synthase (NCBI) low > 76
Escherichia coli ECOR27 1.00 NOLOHH_13125 yfhH MurR/RpiR family transcriptional regulator 1.00 NOLOHH_14935 rsuA 16S rRNA pseudouridine(516) synthase RsuA low > 75
Escherichia coli ECOR38 1.00 HEPCGN_20595 yfhH MurR/RpiR family transcriptional regulator 0.99 HEPCGN_22625 rsuA 16S rRNA pseudouridine(516) synthase RsuA low > 87
Escherichia coli Nissle 1917 1.00 ECOLIN_RS14490 MurR/RpiR family transcriptional regulator 1.00 ECOLIN_RS12760 16S rRNA pseudouridine(516) synthase RsuA — —
Escherichia fergusonii Becca 1.00 EFB2_01335 HTH-type transcriptional regulator MurR 1.00 EFB2_01673 Ribosomal small subunit pseudouridine synthase A low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.83 GFF2466 Sialic acid utilization regulator, RpiR family 0.95 GFF3753 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) low > 78
Enterobacter asburiae PDN3 0.81 EX28DRAFT_0085 transcriptional regulator, RpiR family 0.91 EX28DRAFT_0378 pseudouridine synthase low > 76
Enterobacter sp. TBS_079 0.80 MPMX20_03432 HTH-type transcriptional regulator MurR 0.90 MPMX20_03149 Ribosomal small subunit pseudouridine synthase A low > 85
Klebsiella michiganensis M5al 0.78 BWI76_RS21290 DNA-binding transcriptional regulator 0.89 BWI76_RS19810 16S rRNA pseudouridine(516) synthase — —
Pantoea sp. MT58 0.66 IAI47_04910 MurR/RpiR family transcriptional regulator 0.84 IAI47_06585 16S rRNA pseudouridine(516) synthase RsuA low > 76
Serratia liquefaciens MT49 0.63 IAI46_19515 MurR/RpiR family transcriptional regulator 0.83 IAI46_17345 16S rRNA pseudouridine(516) synthase RsuA low > 86
Rahnella sp. WP5 0.61 EX31_RS21865 MurR/RpiR family transcriptional regulator 0.79 EX31_RS19195 16S rRNA pseudouridine(516) synthase RsuA low > 89
Erwinia tracheiphila SCR3 0.61 LU632_RS18000 MurR/RpiR family transcriptional regulator 0.82 LU632_RS17595 rsuA 16S rRNA pseudouridine(516) synthase RsuA low > 74
Lysobacter sp. OAE881 0.21 ABIE51_RS13700 MurR/RpiR family transcriptional regulator 0.31 ABIE51_RS18480 pseudouridine synthase low > 62
Dyella japonica UNC79MFTsu3.2 0.18 ABZR86_RS12100 MurR/RpiR family transcriptional regulator 0.32 ABZR86_RS00325 16S rRNA pseudouridine(516) synthase low > 74
Rhodanobacter sp. FW510-T8 0.18 OKGIIK_12345 rpiR transcriptional regulator 0.30 OKGIIK_09050 Pseudouridine synthase low > 52
Rhodanobacter denitrificans MT42 0.18 LRK55_RS11245 MurR/RpiR family transcriptional regulator 0.31 LRK55_RS15690 pseudouridine synthase low > 63
Rhodanobacter denitrificans FW104-10B01 0.17 LRK54_RS11515 MurR/RpiR family transcriptional regulator 0.30 LRK54_RS15935 rRNA pseudouridine synthase low > 59
Caulobacter crescentus NA1000 0.10 CCNA_01355 transcriptional regulator IolR 0.35 CCNA_01915 ribosomal small subunit pseudouridine synthase A low > 66
Caulobacter crescentus NA1000 Δfur 0.10 CCNA_01355 transcriptional regulator IolR 0.35 CCNA_01915 ribosomal small subunit pseudouridine synthase A low > 67

Not shown: 0 genomes with orthologs for BNILDI_11925 only; 35 genomes with orthologs for BNILDI_13855 only