Conservation of cofitness between BNILDI_15745 and BNILDI_13840 in Escherichia coli ECRC62

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC62 1.0 BNILDI_15745 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.0 BNILDI_13840 yejK nucleoid-associated protein YejK 0.67 16
Escherichia coli ECOR27 1.00 NOLOHH_16950 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.00 NOLOHH_14920 yejK nucleoid-associated protein YejK — —
Escherichia coli BL21 0.99 ECD_01806 16S rRNA m(5)C1407 methyltransferase, SAM-dependent 0.99 ECD_02116 spermidine nucleoid-associated protein — —
Escherichia coli ECOR38 0.99 HEPCGN_04840 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.00 HEPCGN_22610 yejK nucleoid-associated protein YejK low > 87
Escherichia fergusonii Becca 0.98 EFB2_02166 Ribosomal RNA small subunit methyltransferase F 1.00 EFB2_01670 Nucleoid-associated protein YejK low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.98 OHPLBJKB_01896 Ribosomal RNA small subunit methyltransferase F 1.00 OHPLBJKB_01523 Nucleoid-associated protein YejK low > 73
Escherichia coli BW25113 0.98 b1835 yebU putative nucleolar proteins (VIMSS) 1.00 b2186 yejK nucleoid-associated protein NdpA (NCBI) 0.24 69
Escherichia coli Nissle 1917 0.98 ECOLIN_RS10215 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.00 ECOLIN_RS12775 nucleoid-associated protein YejK — —
Escherichia coli ECRC98 0.97 JDDGAC_01015 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.00 JDDGAC_27305 yejK nucleoid-associated protein YejK low > 86
Escherichia coli ECRC102 0.97 NIAGMN_01620 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.00 NIAGMN_21110 yejK nucleoid-associated protein YejK — —
Escherichia coli ECRC101 0.97 MCAODC_18965 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.00 MCAODC_14395 yejK nucleoid-associated protein YejK low > 87
Escherichia coli ECRC100 0.97 OKFHMN_26440 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.00 OKFHMN_23345 yejK nucleoid-associated protein YejK — —
Escherichia coli ECRC99 0.97 KEDOAH_01665 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.00 KEDOAH_04840 yejK nucleoid-associated protein YejK — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.87 GFF2850 Ribosomal RNA small subunit methyltransferase F (EC 2.1.1.-) 0.97 GFF3749 Nucleoid-associated protein NdpA low > 78
Enterobacter asburiae PDN3 0.80 EX28DRAFT_0721 NOL1/NOP2/sun family putative RNA methylase 0.95 EX28DRAFT_0375 Nucleoid-associated protein low > 76
Enterobacter sp. TBS_079 0.79 MPMX20_02742 Ribosomal RNA small subunit methyltransferase F 0.94 MPMX20_03152 Nucleoid-associated protein YejK low > 85
Klebsiella michiganensis M5al 0.76 BWI76_RS18000 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.92 BWI76_RS19835 nucleoid-associated protein YejK low > 92
Pantoea sp. MT58 0.70 IAI47_08680 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.82 IAI47_06570 nucleoid-associated protein YejK low > 76
Serratia liquefaciens MT49 0.68 IAI46_10775 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.80 IAI46_17360 nucleoid-associated protein YejK low > 86
Pectobacterium carotovorum WPP14 0.67 HER17_RS11715 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.83 HER17_RS12975 nucleoid-associated protein YejK low > 75
Rahnella sp. WP5 0.67 EX31_RS24855 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.81 EX31_RS19210 nucleoid-associated protein YejK low > 89
Dickeya dadantii 3937 0.66 DDA3937_RS11990 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.82 DDA3937_RS09125 nucleoid-associated protein YejK low > 74
Dickeya dianthicola ME23 0.65 DZA65_RS12530 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.82 DZA65_RS09465 nucleoid-associated protein YejK low > 75
Dickeya dianthicola 67-19 0.65 HGI48_RS12080 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.82 HGI48_RS09165 nucleoid-associated protein YejK 0.56 15
Vibrio cholerae E7946 ATCC 55056 0.57 CSW01_07545 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.52 CSW01_10190 nucleoid-associated protein low > 62
Shewanella loihica PV-4 0.51 Shew_1583 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF (RefSeq) 0.46 Shew_1472 nucleoid-associated protein NdpA (RefSeq) low > 60
Shewanella sp. ANA-3 0.51 Shewana3_1770 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF (RefSeq) 0.45 Shewana3_2426 nucleoid-associated protein NdpA (RefSeq) low > 73
Shewanella oneidensis MR-1 0.50 SO2609 NOL1/NOP2/sun family protein (NCBI ptt file) 0.44 SO2177 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.48 Sama_2039 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF (RefSeq) 0.46 Sama_1557 nucleoid-associated protein NdpA (RefSeq) low > 62

Not shown: 8 genomes with orthologs for BNILDI_15745 only; 17 genomes with orthologs for BNILDI_13840 only