Conservation of cofitness between BNILDI_15705 and BNILDI_10290 in Escherichia coli ECRC62

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC62 1.0 BNILDI_15705 yobA CopC domain-containing protein YobA 1.0 BNILDI_10290 kduD 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD 0.65 20
Escherichia coli ECOR27 0.99 NOLOHH_16910 yobA CopC domain-containing protein YobA 0.99 NOLOHH_11810 kduD 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD low > 75
Escherichia coli Nissle 1917 0.98 ECOLIN_RS10250 CopC domain-containing protein YobA 0.98 ECOLIN_RS15950 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD — —
Escherichia coli BW25113 0.98 b1841 yobA hypothetical protein (NCBI) 1.00 b2842 kduD 2-deoxy-D-gluconate 3-dehydrogenase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.98 OHPLBJKB_01890 Protein YobA 1.00 OHPLBJKB_00887 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase low > 73
Escherichia fergusonii Becca 0.98 EFB2_02103 Protein YobA 0.98 EFB2_01041 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase low > 86
Escherichia coli ECRC99 0.98 KEDOAH_01705 yobA CopC domain-containing protein YobA 0.99 KEDOAH_08205 kduD 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD — —
Escherichia coli ECRC101 0.98 MCAODC_19005 yobA CopC domain-containing protein YobA 0.99 MCAODC_10450 kduD 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD low > 87
Escherichia coli ECRC98 0.98 JDDGAC_00975 yobA CopC domain-containing protein YobA 0.99 JDDGAC_23590 kduD 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD low > 86
Escherichia coli ECRC102 0.98 NIAGMN_01660 yobA CopC domain-containing protein YobA 0.99 NIAGMN_17695 kduD 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD — —
Escherichia coli ECRC100 0.98 OKFHMN_26400 yobA CopC domain-containing protein YobA 0.99 OKFHMN_19925 kduD 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD low > 80
Escherichia coli ECOR38 0.97 HEPCGN_04800 yobA CopC domain-containing protein YobA 0.99 HEPCGN_19585 kduD 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.69 GFF1620 Copper resistance protein CopC 0.95 GFF1327 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125) low > 78
Enterobacter asburiae PDN3 0.55 EX28DRAFT_0713 Uncharacterized protein, homolog of Cu resistance protein CopC 0.92 EX28DRAFT_2921 2-deoxy-D-gluconate 3-dehydrogenase low > 76
Enterobacter sp. TBS_079 0.52 MPMX20_02748 Protein YobA 0.94 MPMX20_03715 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase low > 85
Klebsiella michiganensis M5al 0.51 BWI76_RS18060 hypothetical protein 0.94 BWI76_RS23430 2-deoxy-D-gluconate 3-dehydrogenase low > 92
Erwinia tracheiphila SCR3 0.45 LU632_RS13300 yobA CopC domain-containing protein YobA 0.84 LU632_RS00060 kduD 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD low > 74
Rahnella sp. WP5 0.41 EX31_RS24770 copper homeostasis periplasmic binding protein CopC 0.88 EX31_RS01480 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD low > 89
Dickeya dadantii 3937 0.33 DDA3937_RS10160 copper homeostasis periplasmic binding protein CopC 0.87 DDA3937_RS11335 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD low > 74
Dickeya dianthicola ME23 0.33 DZA65_RS10605 copper homeostasis periplasmic binding protein CopC 0.86 DZA65_RS11720 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD — —
Dickeya dianthicola 67-19 0.31 HGI48_RS10190 copper homeostasis periplasmic binding protein CopC 0.86 HGI48_RS11375 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD low > 71
Rhizobium sp. OAE497 0.31 ABIE40_RS22750 copper homeostasis periplasmic binding protein CopC 0.59 ABIE40_RS25290 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD low > 107
Burkholderia phytofirmans PsJN 0.30 BPHYT_RS16425 copper resistance protein 0.62 BPHYT_RS10945 2-deoxy-D-gluconate 3-dehydrogenase — —
Pseudomonas fluorescens SBW25-INTG 0.30 PFLU_RS19270 copper homeostasis periplasmic binding protein CopC 0.29 PFLU_RS18185 SDR family oxidoreductase low > 109
Pseudomonas fluorescens SBW25 0.30 PFLU_RS19270 copper homeostasis periplasmic binding protein CopC 0.29 PFLU_RS18185 SDR family oxidoreductase low > 109
Pseudomonas simiae WCS417 0.29 PS417_17345 hypothetical protein 0.29 PS417_12050 short-chain dehydrogenase low > 88
Paraburkholderia sabiae LMG 24235 0.28 QEN71_RS02285 copper homeostasis periplasmic binding protein CopC 0.63 QEN71_RS37290 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD low > 153
Paraburkholderia graminis OAS925 0.25 ABIE53_005709 methionine-rich copper-binding protein CopC 0.68 ABIE53_002285 2-deoxy-D-gluconate 3-dehydrogenase low > 113
Pseudomonas syringae pv. syringae B728a ΔmexB 0.24 Psyr_1495 Copper resistance protein CopC 0.30 Psyr_2568 Short-chain dehydrogenase/reductase SDR — —
Pseudomonas syringae pv. syringae B728a 0.24 Psyr_1495 Copper resistance protein CopC 0.30 Psyr_2568 Short-chain dehydrogenase/reductase SDR — —
Cupriavidus basilensis FW507-4G11 0.22 RR42_RS35360 copper resistance protein CopC 0.30 RR42_RS31670 NAD-dependent dehydratase low > 128
Brevundimonas sp. GW460-12-10-14-LB2 0.22 A4249_RS03230 copper homeostasis periplasmic binding protein CopC 0.65 A4249_RS07665 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD low > 48
Ralstonia sp. UNC404CL21Col 0.21 ABZR87_RS21865 copper homeostasis periplasmic binding protein CopC 0.64 ABZR87_RS20810 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD — —

Not shown: 14 genomes with orthologs for BNILDI_15705 only; 21 genomes with orthologs for BNILDI_10290 only