Conservation of cofitness between BNILDI_15745 and BNILDI_06030 in Escherichia coli ECRC62

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC62 1.0 BNILDI_15745 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.0 BNILDI_06030 yjaG Uncharacterized protein YjaG 0.76 3
Escherichia coli ECOR27 1.00 NOLOHH_16950 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.00 NOLOHH_05495 yjaG Uncharacterized protein YjaG — —
Escherichia coli BL21 0.99 ECD_01806 16S rRNA m(5)C1407 methyltransferase, SAM-dependent 1.00 ECD_03876 DUF416 domain protein — —
Escherichia coli ECOR38 0.99 HEPCGN_04840 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.00 HEPCGN_11985 yjaG Uncharacterized protein YjaG low > 87
Escherichia fergusonii Becca 0.98 EFB2_02166 Ribosomal RNA small subunit methyltransferase F 1.00 EFB2_04612 hypothetical protein low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.98 OHPLBJKB_01896 Ribosomal RNA small subunit methyltransferase F 1.00 OHPLBJKB_04051 hypothetical protein low > 73
Escherichia coli BW25113 0.98 b1835 yebU putative nucleolar proteins (VIMSS) 1.00 b3999 yjaG hypothetical protein (NCBI) 0.23 75
Escherichia coli Nissle 1917 0.98 ECOLIN_RS10215 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.00 ECOLIN_RS23065 YjaG family protein — —
Escherichia coli ECRC98 0.97 JDDGAC_01015 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.99 JDDGAC_16975 yjaG Uncharacterized protein YjaG low > 86
Escherichia coli ECRC99 0.97 KEDOAH_01665 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.99 KEDOAH_14810 yjaG Uncharacterized protein YjaG — —
Escherichia coli ECRC102 0.97 NIAGMN_01620 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.99 NIAGMN_11100 yjaG Uncharacterized protein YjaG — —
Escherichia coli ECRC100 0.97 OKFHMN_26440 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.99 OKFHMN_13350 yjaG Uncharacterized protein YjaG — —
Escherichia coli ECRC101 0.97 MCAODC_18965 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.99 MCAODC_03850 yjaG Uncharacterized protein YjaG 0.47 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.87 GFF2850 Ribosomal RNA small subunit methyltransferase F (EC 2.1.1.-) 0.96 GFF4193 FIG01200173: hypothetical protein low > 78
Enterobacter asburiae PDN3 0.80 EX28DRAFT_0721 NOL1/NOP2/sun family putative RNA methylase 0.93 EX28DRAFT_4541 Uncharacterized protein conserved in bacteria low > 76
Enterobacter sp. TBS_079 0.79 MPMX20_02742 Ribosomal RNA small subunit methyltransferase F 0.94 MPMX20_00222 hypothetical protein low > 85
Klebsiella michiganensis M5al 0.76 BWI76_RS18000 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.95 BWI76_RS01580 hypothetical protein low > 92
Pantoea sp. MT58 0.70 IAI47_08680 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.85 IAI47_18060 YjaG family protein low > 76
Serratia liquefaciens MT49 0.68 IAI46_10775 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.84 IAI46_01345 YjaG family protein low > 86
Pectobacterium carotovorum WPP14 0.67 HER17_RS11715 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.84 HER17_RS20355 YjaG family protein low > 75
Rahnella sp. WP5 0.67 EX31_RS24855 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.84 EX31_RS16840 YjaG family protein low > 89
Dickeya dadantii 3937 0.66 DDA3937_RS11990 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.86 DDA3937_RS01200 YjaG family protein low > 74
Dickeya dianthicola ME23 0.65 DZA65_RS12530 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.86 DZA65_RS01240 YjaG family protein low > 75
Dickeya dianthicola 67-19 0.65 HGI48_RS12080 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.86 HGI48_RS01195 YjaG family protein low > 71
Vibrio cholerae E7946 ATCC 55056 0.57 CSW01_07545 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.60 CSW01_01385 DUF416 domain-containing protein low > 62
Shewanella loihica PV-4 0.51 Shew_1583 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF (RefSeq) 0.30 Shew_1199 hypothetical protein (RefSeq) low > 60
Shewanella sp. ANA-3 0.51 Shewana3_1770 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF (RefSeq) 0.31 Shewana3_1108 hypothetical protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.50 SO2609 NOL1/NOP2/sun family protein (NCBI ptt file) 0.30 SO3458 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.48 Sama_2039 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF (RefSeq) 0.30 Sama_1030 hypothetical protein (RefSeq) low > 62

Not shown: 8 genomes with orthologs for BNILDI_15745 only; 3 genomes with orthologs for BNILDI_06030 only