Conservation of cofitness between BNILDI_10050 and BNILDI_00855 in Escherichia coli ECRC62

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC62 1.0 BNILDI_10050 idi isopentenyl-diphosphate Delta-isomerase 1.0 BNILDI_00855 Transcriptional regulatory protein QseB 0.64 8
Escherichia coli ECRC98 0.98 JDDGAC_23235 idi isopentenyl-diphosphate Delta-isomerase 1.00 JDDGAC_22515 Transcriptional regulatory protein QseB low > 86
Escherichia coli ECRC100 0.98 OKFHMN_19595 idi isopentenyl-diphosphate Delta-isomerase 1.00 OKFHMN_18880 Transcriptional regulatory protein QseB low > 80
Escherichia coli ECRC99 0.98 KEDOAH_08545 idi isopentenyl-diphosphate Delta-isomerase 1.00 KEDOAH_09265 Transcriptional regulatory protein QseB — —
Escherichia coli ECOR27 0.98 NOLOHH_11520 idi isopentenyl-diphosphate Delta-isomerase 1.00 NOLOHH_10660 Transcriptional regulatory protein QseB low > 75
Escherichia coli ECRC102 0.98 NIAGMN_17360 idi isopentenyl-diphosphate Delta-isomerase 1.00 NIAGMN_16645 Transcriptional regulatory protein QseB — —
Escherichia coli BL21 0.98 ECD_02721 isopentenyl diphosphate isomerase 1.00 ECD_02897 quorum sensing DNA-binding response regulator in two-component regulatory system with QseC low > 61
Escherichia coli ECRC101 0.98 MCAODC_10115 idi isopentenyl-diphosphate Delta-isomerase 1.00 MCAODC_09395 Transcriptional regulatory protein QseB low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.98 OHPLBJKB_00826 Isopentenyl-diphosphate Delta-isomerase 0.99 OHPLBJKB_00677 Transcriptional regulatory protein QseB low > 73
Escherichia coli BW25113 0.95 b2889 idi isopentenyl-diphosphate delta-isomerase (NCBI) 0.99 b3025 qseB DNA-binding response regulator in two-component regulatory system with QseC (NCBI) low > 76
Escherichia coli Nissle 1917 0.94 ECOLIN_RS16100 isopentenyl-diphosphate Delta-isomerase 0.99 ECOLIN_RS17425 quorum sensing response regulator transcription factor QseB low > 55
Escherichia fergusonii Becca 0.94 EFB2_01012 Isopentenyl-diphosphate Delta-isomerase 1.00 EFB2_00788 Transcriptional regulatory protein QseB low > 86
Escherichia coli ECOR38 0.93 HEPCGN_18885 idi isopentenyl-diphosphate Delta-isomerase 1.00 HEPCGN_17740 Quorum sensing DNA-binding response regulator in two-component regulatory system with QseC low > 87
Klebsiella michiganensis M5al 0.71 BWI76_RS23790 isopentenyl-diphosphate Delta-isomerase 0.85 BWI76_RS24335 two-component system response regulator QseB — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF2986 Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) 0.89 GFF3138 Two-component system response regulator QseB low > 78
Enterobacter asburiae PDN3 0.67 EX28DRAFT_2940 isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) 0.84 EX28DRAFT_3057 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain low > 76
Enterobacter sp. TBS_079 0.66 MPMX20_03748 Isopentenyl-diphosphate Delta-isomerase 0.84 MPMX20_03863 Transcriptional regulatory protein QseB low > 85
Rahnella sp. WP5 0.52 EX31_RS02215 isopentenyl-diphosphate Delta-isomerase 0.71 EX31_RS03275 response regulator low > 89
Pedobacter sp. GW460-11-11-14-LB5 0.30 CA265_RS07605 isopentenyl-diphosphate delta-isomerase 0.32 CA265_RS15210 DNA-binding response regulator low > 88
Rhodanobacter denitrificans MT42 0.28 LRK55_RS08325 isopentenyl-diphosphate Delta-isomerase 0.43 LRK55_RS13865 response regulator transcription factor low > 63
Rhodanobacter denitrificans FW104-10B01 0.28 LRK54_RS08560 isopentenyl-diphosphate Delta-isomerase 0.43 LRK54_RS14145 response regulator transcription factor 0.26 27
Pseudomonas fluorescens FW300-N2E3 0.25 AO353_19625 isopentenyl-diphosphate delta-isomerase 0.46 AO353_19370 transcriptional regulator low > 101
Pectobacterium carotovorum WPP14 0.25 HER17_RS13245 isopentenyl-diphosphate Delta-isomerase 0.65 HER17_RS21560 response regulator low > 75
Serratia liquefaciens MT49 0.24 IAI46_11275 isopentenyl-diphosphate Delta-isomerase 0.68 IAI46_21235 response regulator low > 86
Pantoea sp. MT58 0.23 IAI47_13340 isopentenyl-diphosphate Delta-isomerase 0.71 IAI47_00340 response regulator low > 76
Dinoroseobacter shibae DFL-12 0.23 Dshi_3527 isopentenyl-diphosphate delta-isomerase, type 1 (RefSeq) 0.32 Dshi_3124 two component transcriptional regulator, winged helix family (RefSeq) — —

Not shown: 2 genomes with orthologs for BNILDI_10050 only; 48 genomes with orthologs for BNILDI_00855 only