Conservation of cofitness between AO353_16875 and AO353_08365 in Pseudomonas fluorescens FW300-N2E3

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N2E3 1.0 AO353_16875 ribosomal protein S12 methylthiotransferase RimO 1.0 AO353_08365 L-cystine transporter tcyP 0.32 10
Pseudomonas fluorescens GW456-L13 0.98 PfGW456L13_4653 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase 0.92 PfGW456L13_970 L-cystine uptake protein TcyP low > 87
Pseudomonas fluorescens FW300-N1B4 0.98 Pf1N1B4_3160 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase 0.92 Pf1N1B4_2301 L-cystine uptake protein TcyP low > 87
Pseudomonas sp. RS175 0.97 PFR28_00486 Ribosomal protein S12 methylthiotransferase RimO 0.87 PFR28_04280 L-cystine uptake protein TcyP low > 88
Pseudomonas fluorescens FW300-N2C3 0.96 AO356_05600 ribosomal protein S12 methylthiotransferase RimO 0.88 AO356_13240 L-cystine transporter tcyP low > 104
Pseudomonas fluorescens FW300-N2E2 0.96 Pf6N2E2_2978 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase 0.86 Pf6N2E2_4562 L-cystine uptake protein TcyP low > 103
Pseudomonas fluorescens SBW25 0.96 PFLU_RS05950 30S ribosomal protein S12 methylthiotransferase RimO 0.92 PFLU_RS28560 L-cystine transporter low > 109
Pseudomonas fluorescens SBW25-INTG 0.96 PFLU_RS05950 30S ribosomal protein S12 methylthiotransferase RimO 0.92 PFLU_RS28560 L-cystine transporter low > 109
Pseudomonas simiae WCS417 0.96 PS417_05880 ribosomal protein S12 methylthiotransferase 0.92 PS417_26900 L-cystine transporter tcyP low > 88
Pseudomonas putida KT2440 0.89 PP_1197 ribosomal protein S12 methylthiotransferase 0.77 PP_5131 sodium-cystine symporter low > 96
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.72 GFF731 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase 0.78 GFF3510 L-cystine uptake protein TcyP low > 78
Erwinia tracheiphila SCR3 0.72 LU632_RS09580 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.74 LU632_RS10855 L-cystine transporter low > 74
Escherichia coli ECOR27 0.72 NOLOHH_22430 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.78 NOLOHH_17525 tcyP cystine/sulfocysteine:cation symporter low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.72 OHPLBJKB_02875 Ribosomal protein S12 methylthiotransferase RimO 0.78 OHPLBJKB_02004 L-cystine uptake protein TcyP low > 73
Escherichia coli ECOR38 0.72 HEPCGN_01970 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.78 HEPCGN_05370 tcyP cystine/sulfocysteine:cation symporter low > 87
Escherichia coli ECRC62 0.72 BNILDI_20690 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.78 BNILDI_16310 tcyP cystine/sulfocysteine:cation symporter low > 75
Escherichia coli ECRC99 0.72 KEDOAH_21850 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.78 KEDOAH_01105 tcyP cystine/sulfocysteine:cation symporter — —
Escherichia coli ECRC98 0.72 JDDGAC_09695 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.78 JDDGAC_01580 tcyP cystine/sulfocysteine:cation symporter low > 86
Escherichia coli BW25113 0.72 b0835 yliG predicted SAM-dependent methyltransferase (NCBI) 0.78 b1729 ydjN predicted transporter (NCBI) low > 76
Escherichia coli ECRC101 0.72 MCAODC_25275 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.78 MCAODC_18405 tcyP cystine/sulfocysteine:cation symporter low > 87
Escherichia coli BL21 0.72 ECD_00802 ribosomal protein S12 methylthiotransferase 0.78 ECD_01698 putative transporter low > 61
Escherichia coli ECRC102 0.72 NIAGMN_04105 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.78 NIAGMN_01060 tcyP cystine/sulfocysteine:cation symporter — —
Enterobacter asburiae PDN3 0.72 EX28DRAFT_2131 ribosomal protein S12 methylthiotransferase RimO 0.79 EX28DRAFT_1734 Predicted Na+/dicarboxylate symporter low > 76
Escherichia coli ECRC100 0.72 OKFHMN_06060 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.78 OKFHMN_27005 tcyP cystine/sulfocysteine:cation symporter low > 80
Escherichia coli Nissle 1917 0.72 ECOLIN_RS04440 30S ribosomal protein S12 methylthiotransferase RimO 0.78 ECOLIN_RS09650 cystine/sulfocysteine:cation symporter — —
Escherichia fergusonii Becca 0.72 EFB2_03271 Ribosomal protein S12 methylthiotransferase RimO 0.78 EFB2_02263 L-cystine uptake protein TcyP low > 86
Klebsiella michiganensis M5al 0.72 BWI76_RS09115 30S ribosomal protein S12 methylthiotransferase RimO 0.79 BWI76_RS11765 bifunctional transporter/kinase low > 92
Enterobacter sp. TBS_079 0.71 MPMX20_01473 Ribosomal protein S12 methylthiotransferase RimO 0.79 MPMX20_01884 L-cystine uptake protein TcyP low > 85
Dickeya dianthicola 67-19 0.71 HGI48_RS09400 30S ribosomal protein S12 methylthiotransferase RimO 0.74 HGI48_RS11420 L-cystine transporter low > 71
Pectobacterium carotovorum WPP14 0.71 HER17_RS12755 30S ribosomal protein S12 methylthiotransferase RimO 0.72 HER17_RS11455 L-cystine transporter low > 75
Dickeya dianthicola ME23 0.70 DZA65_RS09710 30S ribosomal protein S12 methylthiotransferase RimO 0.73 DZA65_RS11765 L-cystine transporter low > 75
Dickeya dadantii 3937 0.70 DDA3937_RS09385 30S ribosomal protein S12 methylthiotransferase RimO 0.76 DDA3937_RS11380 L-cystine transporter low > 74
Vibrio cholerae E7946 ATCC 55056 0.70 CSW01_13260 30S ribosomal protein S12 methylthiotransferase RimO 0.58 CSW01_06245 L-cystine transporter low > 62
Acinetobacter radioresistens SK82 0.69 MPMX26_01294 Ribosomal protein S12 methylthiotransferase RimO 0.76 MPMX26_01015 L-cystine uptake protein TcyP low > 36
Ralstonia sp. UNC404CL21Col 0.65 ABZR87_RS13275 30S ribosomal protein S12 methylthiotransferase RimO 0.70 ABZR87_RS12075 L-cystine transporter 0.33 8

Not shown: 53 genomes with orthologs for AO353_16875 only; 5 genomes with orthologs for AO353_08365 only