Conservation of cofitness between Shewana3_1742 and Shewana3_2779 in Shewanella sp. ANA-3

16 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella sp. ANA-3 1.0 Shewana3_1742 leucine dehydrogenase (RefSeq) 1.0 Shewana3_2779 transcriptional regulator, TyrR (RefSeq) 0.60 13
Shewanella oneidensis MR-1 0.98 SO2638 ldh leucine dehydrogenase (NCBI ptt file) 0.99 SO1669 tyrR transcriptional regulatory protein TyrR (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.91 Sama_2067 leucine dehydrogenase (RefSeq) 0.91 Sama_2220 transcriptional regulatory protein TyrR (RefSeq) low > 62
Shewanella loihica PV-4 0.89 Shew_1555 Glu/Leu/Phe/Val dehydrogenase, dimerisation region (RefSeq) 0.90 Shew_1437 transcriptional regulator, TyrR (RefSeq) 0.74 2
Pseudomonas sp. S08-1 0.54 OH686_21125 Branched-chain amino acid dehydrogenase [deaminating] 0.40 OH686_21240 Phenylalanine hydroxylase transcriptional activator PhhR 0.64 37
Alteromonas macleodii MIT1002 0.52 MIT1002_01151 Leucine dehydrogenase 0.49 MIT1002_01147 Transcriptional regulatory protein TyrR low > 70
Pseudomonas stutzeri RCH2 0.51 Psest_3516 Leucine dehydrogenase (EC 1.4.1.9) (from data) 0.38 Psest_0782 Transcriptional regulator of aromatic amino acids metabolism low > 67
Pseudomonas putida KT2440 0.40 PP_4617 leucine dehydrogenase 0.39 PP_4489 sigma-54 dependent transcriptional regulator low > 96
Pseudomonas fluorescens GW456-L13 0.40 PfGW456L13_4958 Leucine dehydrogenase (EC 1.4.1.9) 0.40 PfGW456L13_4393 Phenylalanine hydroxylase transcriptional activator PhhR low > 87
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_1021 Leucine dehydrogenase (EC 1.4.1.9) 0.40 Pf1N1B4_3567 Phenylalanine hydroxylase transcriptional activator PhhR low > 87
Pseudomonas fluorescens FW300-N2E3 0.39 AO353_15570 amino acid dehydrogenase 0.40 AO353_18590 AAA family ATPase low > 101
Pseudomonas fluorescens SBW25 0.38 PFLU_RS05110 Glu/Leu/Phe/Val dehydrogenase 0.40 PFLU_RS21865 sigma-54-dependent phenylalanine hydroxylase transcriptional regulator PhhR low > 109
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS05110 Glu/Leu/Phe/Val dehydrogenase 0.40 PFLU_RS21865 sigma-54-dependent phenylalanine hydroxylase transcriptional regulator PhhR low > 109
Pseudomonas simiae WCS417 0.38 PS417_05040 amino acid dehydrogenase 0.40 PS417_19895 ATPase AAA low > 88
Pseudomonas fluorescens FW300-N2C3 0.38 AO356_16845 amino acid dehydrogenase 0.40 AO356_03970 AAA family ATPase low > 104
Pseudomonas sp. RS175 0.38 PFR28_00225 Leucine dehydrogenase 0.41 PFR28_00803 Transcriptional regulatory protein TyrR low > 88
Pseudomonas fluorescens FW300-N2E2 0.38 Pf6N2E2_5294 Leucine dehydrogenase (EC 1.4.1.9) 0.41 Pf6N2E2_2629 Phenylalanine hydroxylase transcriptional activator PhhR low > 103

Not shown: 20 genomes with orthologs for Shewana3_1742 only; 30 genomes with orthologs for Shewana3_2779 only