Conservation of cofitness between Shewana3_1206 and Shewana3_0772 in Shewanella sp. ANA-3

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella sp. ANA-3 1.0 Shewana3_1206 MscS mechanosensitive ion channel (RefSeq) 1.0 Shewana3_0772 invasion gene expression up-regulator, SirB (RefSeq) 0.63 18
Shewanella oneidensis MR-1 0.97 SO3340 hypothetical Small-conductance mechanosensitive channel (NCBI ptt file) 0.99 SO3830 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.85 Sama_2465 putative small-conductance mechanosensitive channel (RefSeq) 0.76 Sama_2564 hypothetical protein (RefSeq) — —
Shewanella loihica PV-4 0.80 Shew_1152 MscS mechanosensitive ion channel (RefSeq) 0.79 Shew_2907 invasion gene expression up-regulator, SirB (RefSeq) low > 60
Vibrio cholerae E7946 ATCC 55056 0.54 CSW01_02550 mechanosensitive ion channel protein 0.42 CSW01_10835 hypothetical protein low > 62
Serratia liquefaciens MT49 0.48 IAI46_20995 small-conductance mechanosensitive channel MscS 0.39 IAI46_10290 SirB2 family protein low > 86
Alteromonas macleodii MIT1002 0.48 MIT1002_03053 Small-conductance mechanosensitive channel 0.35 MIT1002_01517 Invasion gene expression up-regulator, SirB — —
Escherichia fergusonii Becca 0.46 EFB2_00982 Small-conductance mechanosensitive channel 0.21 EFB2_02714 Protein YchQ low > 86
Escherichia coli Nissle 1917 0.46 ECOLIN_RS16250 small-conductance mechanosensitive channel MscS 0.21 ECOLIN_RS07330 invasion regulator SirB2 — —
Escherichia coli BW25113 0.46 b2924 mscS mechanosensitive channel (NCBI) 0.21 b1213 ychQ predicted transcriptional regulator (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_00792 Small-conductance mechanosensitive channel 0.21 OHPLBJKB_02474 Protein YchQ low > 73
Escherichia coli ECOR38 0.46 HEPCGN_18710 mscS small-conductance mechanosensitive channel MscS 0.21 HEPCGN_24925 sirB2 invasion regulator SirB2 low > 87
Escherichia coli BL21 0.46 ECD_02755 mechanosensitive channel protein, small conductance 0.22 ECD_01188 SIRB family inner membrane protein low > 61
Escherichia coli ECRC62 0.46 BNILDI_09850 mscS small-conductance mechanosensitive channel MscS 0.20 BNILDI_18755 sirB2 invasion regulator SirB2 low > 75
Escherichia coli ECOR27 0.46 NOLOHH_11315 mscS small-conductance mechanosensitive channel MscS 0.20 NOLOHH_20600 sirB2 invasion regulator SirB2 low > 75
Rahnella sp. WP5 0.46 EX31_RS21435 small-conductance mechanosensitive channel MscS 0.33 EX31_RS07305 siroheme synthase low > 89
Klebsiella michiganensis M5al 0.46 BWI76_RS23970 mechanosensitive ion channel protein MscS 0.22 BWI76_RS17425 hypothetical protein — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF3019 Protein involved in stability of MscS mechanosensitive channel 0.19 GFF2772 FIG002082: Protein SirB2 low > 78
Pectobacterium carotovorum WPP14 0.43 HER17_RS02700 small-conductance mechanosensitive channel MscS 0.34 HER17_RS10490 SirB2 family protein low > 75
Pantoea sp. MT58 0.42 IAI47_03700 small-conductance mechanosensitive channel MscS 0.30 IAI47_11260 SirB2 family protein low > 76
Kangiella aquimarina DSM 16071 0.42 B158DRAFT_2270 Small-conductance mechanosensitive channel 0.32 B158DRAFT_0359 Uncharacterized protein conserved in bacteria low > 40
Castellaniella sp019104865 MT123 0.32 ABCV34_RS00345 mechanosensitive ion channel family protein 0.28 ABCV34_RS05910 SirB2 family protein low > 48

Not shown: 57 genomes with orthologs for Shewana3_1206 only; 1 genomes with orthologs for Shewana3_0772 only