| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Shewanella amazonensis SB2B | 1.0 | Sama_2211 | | alpha-ketoglutarate TRAP transporter, large permease component (from data) | 1.0 | Sama_0252 | | competence/damage-inducible protein CinA (RefSeq) | 0.39 | 16 |
| Shewanella oneidensis MR-1 | 0.87 | SO3136 | dctM | C4-dicarboxylate transport protein (NCBI ptt file) | 0.80 | SO0272 | cinA | competence/damage-inducible protein CinA (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.87 | Shewana3_1414 | | TRAP dicarboxylate transporter, DctM subunit (RefSeq) | 0.81 | Shewana3_3908 | | competence/damage-inducible protein CinA (RefSeq) | low | > 73 |
| Shewanella loihica PV-4 | 0.84 | Shew_1444 | | dicarboxylate TRAP transporter (succinate, fumarate, L-malate, and alpha-ketoglutarate), large permease component (from data) | 0.73 | Shew_0198 | | competence/damage-inducible protein CinA (RefSeq) | low | > 60 |
| Vibrio cholerae E7946 ATCC 55056 | 0.53 | CSW01_09640 | | C4-dicarboxylate ABC transporter permease | 0.30 | CSW01_06320 | | competence/damage-inducible protein A | low | > 62 |
| Enterobacter sp. TBS_079 | 0.29 | MPMX20_04347 | | C4-dicarboxylate TRAP transporter large permease protein DctM | 0.33 | MPMX20_03189 | | Nicotinamide-nucleotide amidohydrolase PncC | low | > 85 |
| Pantoea sp. MT58 | 0.27 | IAI47_03220 | | TRAP transporter large permease | 0.32 | IAI47_06440 | | nicotinamide mononucleotide deamidase-related protein YfaY | low | > 76 |
| Rahnella sp. WP5 | 0.26 | EX31_RS08020 | | TRAP transporter large permease | 0.32 | EX31_RS19320 | | nicotinamide mononucleotide deamidase-related protein YfaY | low | > 89 |
| Pectobacterium carotovorum WPP14 | 0.25 | HER17_RS19685 | | TRAP transporter large permease | 0.30 | HER17_RS15515 | | nicotinamide mononucleotide deamidase-related protein YfaY | low | > 75 |
| Escherichia coli ECOR27 | 0.25 | NOLOHH_11090 | dctQ | Tripartite ATP-independent periplasmic transporter, DctM component | 0.32 | NOLOHH_14640 | yfaY | nicotinamide mononucleotide deamidase-related protein YfaY | low | > 57 |
| Klebsiella michiganensis M5al | 0.25 | BWI76_RS24135 | | c4-dicarboxylate permease | 0.32 | BWI76_RS20000 | | competence/damage-inducible protein A | low | > 92 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.24 | GFF2273 | | Predicted rhamnogalacturonide-specific TRAP-type transporter, large transmembrane component RhiC | 0.32 | GFF1854 | | Molybdopterin binding motif, CinA N-terminal domain / C-terminal domain of CinA type E | low | > 78 |
| Escherichia coli ECRC62 | 0.23 | BNILDI_07135 | | TRAP transporter large permease | 0.32 | BNILDI_13555 | yfaY | nicotinamide mononucleotide deamidase-related protein YfaY | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.23 | OHPLBJKB_03837 | | C4-dicarboxylate TRAP transporter large permease protein DctM | 0.32 | OHPLBJKB_01462 | | Nicotinamide-nucleotide amidohydrolase PncC | low | > 73 |
| Escherichia coli Nissle 1917 | 0.22 | ECOLIN_RS17390 | | TRAP transporter large permease subunit | 0.32 | ECOLIN_RS13105 | | nicotinamide mononucleotide deamidase-related protein YfaY | 0.46 | 34 |
| Escherichia coli ECOR38 | 0.22 | HEPCGN_01270 | | C4-dicarboxylate ABC transporter | 0.32 | HEPCGN_22230 | yfaY | nicotinamide mononucleotide deamidase-related protein YfaY | low | > 85 |
| Fusobacterium nucleatum SB010 | 0.22 | HUW76_03975 | | TRAP transporter large permease | 0.23 | HUW76_01130 | | CinA family nicotinamide mononucleotide deamidase-related protein | low | > 35 |
| Escherichia fergusonii Becca | 0.21 | EFB2_00228 | | Sialic acid TRAP transporter large permease protein SiaM | 0.32 | EFB2_01607 | | Nicotinamide-nucleotide amidohydrolase PncC | low | > 86 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.21 | Echvi_3627 | | TRAP transporter, DctM subunit | 0.27 | Echvi_2447 | | competence/damage-inducible protein CinA C-terminal domain | low | > 79 |
| Escherichia coli BL21 | 0.19 | ECD_03430 | | 2,3-diketo-L-gulonate TRAP transporter large permease protein | 0.32 | ECD_02175 | | inactive PncC family protein | low | > 60 |
| Escherichia coli BW25113 | 0.19 | b3578 | yiaN | predicted transporter (NCBI) | 0.32 | b2249 | yfaY | competence damage-inducible protein A (NCBI) | low | > 76 |
Not shown: 40 genomes with orthologs for Sama_2211 only; 18 genomes with orthologs for Sama_0252 only