Conservation of cofitness between Sama_1236 and Sama_0192 in Shewanella amazonensis SB2B

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella amazonensis SB2B 1.0 Sama_1236 psp operon transcriptional activator (RefSeq) 1.0 Sama_0192 DNA-binding transcriptional repressor FabR (RefSeq) 0.35 20
Shewanella sp. ANA-3 0.81 Shewana3_2649 Fis family transcriptional regulator (RefSeq) 0.91 Shewana3_0178 DNA-binding transcriptional repressor FabR (RefSeq) low > 73
Shewanella oneidensis MR-1 0.81 SO1806 pspF psp operon transcriptional activator (NCBI ptt file) 0.91 SO0198 transcriptional regulator, TetR family (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.77 Shew_2497 sigma-54 dependent trancsriptional regulator (RefSeq) 0.92 Shew_0137 DNA-binding transcriptional repressor FabR (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.63 MIT1002_01142 Phage shock protein F 0.51 MIT1002_03371 HTH-type transcriptional repressor FabR low > 70
Dickeya dianthicola ME23 0.57 DZA65_RS12950 phage shock protein operon transcriptional activator 0.67 DZA65_RS21440 HTH-type transcriptional repressor FabR low > 75
Escherichia coli ECOR38 0.57 HEPCGN_25785 pspF phage shock protein operon transcriptional activator 0.67 HEPCGN_12200 fabR HTH-type transcriptional repressor FabR low > 85
Dickeya dianthicola 67-19 0.57 HGI48_RS12500 phage shock protein operon transcriptional activator 0.67 HGI48_RS20395 HTH-type transcriptional repressor FabR low > 71
Escherichia fergusonii Becca 0.57 EFB2_02624 Psp operon transcriptional activator 0.67 EFB2_04647 HTH-type transcriptional repressor FabR low > 86
Escherichia coli BW25113 0.57 b1303 pspF psp operon transcriptional activator (VIMSS) 0.67 b3963 fabR DNA-binding transcriptional repressor (RefSeq) low > 76
Escherichia coli BL21 0.57 ECD_01280 psp operon transcriptional activator 0.67 ECD_03848 transcriptional repressor of fabA and fabB — —
Dickeya dadantii 3937 0.57 DDA3937_RS12430 phage shock protein operon transcriptional activator 0.66 DDA3937_RS00980 HTH-type transcriptional repressor FabR low > 74
Escherichia coli ECRC62 0.57 BNILDI_18250 pspF phage shock protein operon transcriptional activator 0.67 BNILDI_05835 fabR HTH-type transcriptional repressor FabR — —
Escherichia coli Nissle 1917 0.57 ECOLIN_RS07845 phage shock protein operon transcriptional activator 0.67 ECOLIN_RS22890 HTH-type transcriptional repressor FabR — —
Escherichia coli ECRC101 0.57 MCAODC_15855 pspF phage shock protein operon transcriptional activator 0.67 MCAODC_04045 fabR HTH-type transcriptional repressor FabR — —
Escherichia coli ECOR27 0.57 NOLOHH_20100 pspF phage shock protein operon transcriptional activator 0.67 NOLOHH_05690 fabR HTH-type transcriptional repressor FabR — —
Escherichia coli ECRC102 0.57 NIAGMN_26585 pspF phage shock protein operon transcriptional activator 0.67 NIAGMN_11295 fabR HTH-type transcriptional repressor FabR — —
Escherichia coli ECRC98 0.57 JDDGAC_04960 pspF phage shock protein operon transcriptional activator 0.67 JDDGAC_17170 fabR HTH-type transcriptional repressor FabR — —
Escherichia coli ECRC101 0.57 OKFHMN_02415 pspF phage shock protein operon transcriptional activator 0.67 OKFHMN_13545 fabR HTH-type transcriptional repressor FabR — —
Escherichia coli ECRC99 0.57 KEDOAH_26360 pspF phage shock protein operon transcriptional activator 0.67 KEDOAH_14615 fabR HTH-type transcriptional repressor FabR — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.57 OHPLBJKB_02379 Psp operon transcriptional activator 0.67 OHPLBJKB_04087 HTH-type transcriptional repressor FabR low > 73
Rahnella sp. WP5 0.57 EX31_RS15690 phage shock protein operon transcriptional activator 0.66 EX31_RS14160 HTH-type transcriptional repressor FabR low > 89
Enterobacter sp. TBS_079 0.57 MPMX20_02473 Psp operon transcriptional activator 0.67 MPMX20_04517 HTH-type transcriptional repressor FabR low > 85
Serratia liquefaciens MT49 0.56 IAI46_13505 phage shock protein operon transcriptional activator 0.66 IAI46_24465 HTH-type transcriptional repressor FabR low > 86
Enterobacter asburiae PDN3 0.56 EX28DRAFT_0975 psp operon transcriptional activator PspF 0.67 EX28DRAFT_4426 transcriptional regulator, TetR family low > 76
Pectobacterium carotovorum WPP14 0.56 HER17_RS09515 phage shock protein operon transcriptional activator 0.67 HER17_RS00965 HTH-type transcriptional repressor FabR low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.56 GFF2687 Psp operon transcriptional activator 0.67 GFF2349 Unsaturated fatty acid biosythesis repressor FabR, TetR family low > 78
Pantoea sp. MT58 0.55 IAI47_09390 phage shock protein operon transcriptional activator 0.68 IAI47_00940 HTH-type transcriptional repressor FabR low > 76
Klebsiella michiganensis M5al 0.55 BWI76_RS12445 phage shock protein operon transcriptional activator 0.67 BWI76_RS00875 DNA-binding transcriptional regulator FabR 0.24 84
Erwinia tracheiphila SCR3 0.54 LU632_RS11565 pspF phage shock protein operon transcriptional activator 0.67 LU632_RS19580 fabR HTH-type transcriptional repressor FabR low > 74
Vibrio cholerae E7946 ATCC 55056 0.54 CSW01_08440 phage shock protein operon transcriptional activator 0.65 CSW01_00775 HTH-type transcriptional repressor FabR low > 62

Not shown: 6 genomes with orthologs for Sama_1236 only; 9 genomes with orthologs for Sama_0192 only