Conservation of cofitness between Shew_3694 and Shew_2886 in Shewanella loihica PV-4

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella loihica PV-4 1.0 Shew_3694 ADP-L-glycero-D-manno-heptose-6-epimerase (RefSeq) 1.0 Shew_2886 rRNA (guanine-N(2)-)-methyltransferase (RefSeq) 0.51 15
Enterobacter asburiae PDN3 0.62 EX28DRAFT_3871 ADP-L-glycero-D-manno-heptose-6-epimerase 0.32 EX28DRAFT_3153 16S RNA G1207 methylase RsmC — —
Enterobacter sp. TBS_079 0.62 MPMX20_00114 ADP-L-glycero-D-manno-heptose-6-epimerase 0.32 MPMX20_03995 Ribosomal RNA large subunit methyltransferase G — —
Klebsiella pneumoniae MKP103 0.62 KDGMDA_07945 ADP-glyceromanno-heptose 6-epimerase 0.32 KDGMDA_05550 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG — —
Klebsiella michiganensis M5al 0.62 BWI76_RS27260 ADP-L-glycero-D-mannoheptose-6-epimerase 0.32 BWI76_RS24680 23S rRNA (guanine(1835)-N(2))-methyltransferase — —
Rahnella sp. WP5 0.62 EX31_RS14395 ADP-glyceromanno-heptose 6-epimerase 0.31 EX31_RS08350 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG — —
Escherichia coli Nissle 1917 0.61 ECOLIN_RS20645 ADP-glyceromanno-heptose 6-epimerase 0.33 ECOLIN_RS17790 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG — —
Escherichia coli ECOR38 0.61 HEPCGN_14545 rfaD ADP-glyceromanno-heptose 6-epimerase 0.33 HEPCGN_17415 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.61 OHPLBJKB_00081 ADP-L-glycero-D-manno-heptose-6-epimerase 0.32 OHPLBJKB_00618 Ribosomal RNA large subunit methyltransferase G — —
Escherichia fergusonii Becca 0.61 EFB2_00192 ADP-L-glycero-D-manno-heptose-6-epimerase 0.33 EFB2_00728 Ribosomal RNA large subunit methyltransferase G — —
Escherichia coli BW25113 0.61 b3619 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) 0.33 b3084 ygjO putative enzyme (VIMSS) low > 76
Escherichia coli ECRC99 0.61 KEDOAH_12450 rfaD ADP-glyceromanno-heptose 6-epimerase 0.33 KEDOAH_09585 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG — —
Escherichia coli BL21 0.61 ECD_03476 ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding 0.33 ECD_02953 23S rRNA m(2)G1835 methyltransferase, SAM-dependent — —
Escherichia coli ECRC102 0.61 NIAGMN_13460 rfaD ADP-glyceromanno-heptose 6-epimerase 0.33 NIAGMN_16325 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG — —
Escherichia coli ECRC62 0.61 BNILDI_03930 rfaD ADP-glyceromanno-heptose 6-epimerase 0.33 BNILDI_01155 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG — —
Escherichia coli ECRC101 0.61 MCAODC_06210 rfaD ADP-glyceromanno-heptose 6-epimerase 0.33 MCAODC_09075 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG — —
Escherichia coli ECRC98 0.61 JDDGAC_19325 rfaD ADP-glyceromanno-heptose 6-epimerase 0.33 JDDGAC_22195 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG — —
Escherichia coli ECOR27 0.61 NOLOHH_07580 rfaD ADP-glyceromanno-heptose 6-epimerase 0.33 NOLOHH_10360 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG — —
Escherichia coli ECRC100 0.61 OKFHMN_15700 rfaD ADP-glyceromanno-heptose 6-epimerase 0.33 OKFHMN_18560 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG — —
Pantoea agglomerans CFBP13505 P0401 0.61 PagCFBP13505_RS18655 ADP-glyceromanno-heptose 6-epimerase 0.32 PagCFBP13505_RS11560 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG — —
Pantoea sp. MT58 0.61 IAI47_00690 ADP-glyceromanno-heptose 6-epimerase 0.33 IAI47_02950 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG — —
Dickeya dianthicola 67-19 0.61 HGI48_RS00770 ADP-glyceromanno-heptose 6-epimerase 0.33 HGI48_RS02825 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG — —
Pectobacterium carotovorum WPP14 0.61 HER17_RS20770 ADP-glyceromanno-heptose 6-epimerase 0.34 HER17_RS18680 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.60 GFF392 ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20) 0.33 GFF3186 23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-) low > 78
Dickeya dadantii 3937 0.60 DDA3937_RS20440 ADP-glyceromanno-heptose 6-epimerase 0.35 DDA3937_RS02850 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG — —
Dickeya dianthicola ME23 0.60 DZA65_RS00825 ADP-glyceromanno-heptose 6-epimerase 0.33 DZA65_RS03000 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG — —
Serratia liquefaciens MT49 0.60 IAI46_24735 ADP-glyceromanno-heptose 6-epimerase 0.35 IAI46_22185 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG — —
Erwinia amylovora T8 0.59 OLJFJH_05885 ADP-glyceromanno-heptose 6-epimerase 0.32 OLJFJH_02170 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG — —
Erwinia tracheiphila HP pepo 2.2 0.59 IJEDHG_07870 rfaD ADP-glyceromanno-heptose 6-epimerase 0.33 IJEDHG_06575 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG — —
Erwinia tracheiphila SCR3 0.59 LU632_RS21915 rfaD ADP-glyceromanno-heptose 6-epimerase 0.32 LU632_RS02335 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG — —
Vibrio cholerae E7946 ATCC 55056 0.56 CSW01_01265 ADP-L-glycero-D-mannoheptose-6-epimerase 0.30 CSW01_11685 ribosomal RNA large subunit methyltransferase G low > 62
Pseudomonas sp. SVBP6 0.54 COO64_RS00370 rfaD ADP-glyceromanno-heptose 6-epimerase 0.27 COO64_RS02900 methyltransferase low > 93
Pseudomonas sp. BP01 0.53 JOY50_RS12210 rfaD ADP-glyceromanno-heptose 6-epimerase 0.27 JOY50_RS15705 methyltransferase low > 84
Pseudomonas aeruginosa PA14 0.51 IKLFDK_17110 ADP-glyceromanno-heptose 6-epimerase 0.28 IKLFDK_00425 Ribosomal RNA large subunit methyltransferase G low > 100

Not shown: 27 genomes with orthologs for Shew_3694 only; 21 genomes with orthologs for Shew_2886 only