Conservation of cofitness between Shew_2188 and Shew_2436 in Shewanella loihica PV-4

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella loihica PV-4 1.0 Shew_2188 long-chain-fatty-acid--CoA ligase (RefSeq) 1.0 Shew_2436 membrane protein involved in aromatic hydrocarbon degradation (RefSeq) 0.56 4
Shewanella sp. ANA-3 0.88 Shewana3_2386 long-chain-fatty-acid--CoA ligase (RefSeq) 0.57 Shewana3_1450 membrane protein involved in aromatic hydrocarbon degradation (RefSeq) low > 73
Shewanella oneidensis MR-1 0.86 SO2581 fadD-1 long-chain-fatty-acid--CoA ligase (NCBI ptt file) 0.57 SO3099 long-chain fatty acid transport protein, putative (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.85 Sama_1934 long-chain-fatty-acid--CoA ligase (RefSeq) 0.64 Sama_2178 membrane protein involved in aromatic hydrocarbon degradation (RefSeq) low > 62
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_09905 long-chain-fatty-acid--CoA ligase FadD 0.38 CSW01_05305 long-chain fatty acid transporter low > 62
Escherichia coli HS(pFamp)R (ATCC 700891) 0.69 OHPLBJKB_01928 Long-chain-fatty-acid--CoA ligase 0.24 OHPLBJKB_01362 Long-chain fatty acid transport protein low > 73
Escherichia coli ECOR38 0.69 HEPCGN_04985 fadD long-chain-fatty-acid--CoA ligase FadD 0.24 HEPCGN_21740 fadL long-chain fatty acid transporter FadL low > 85
Escherichia coli BL21 0.69 ECD_01775 acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase) 0.25 ECD_02268 long-chain fatty acid outer membrane transporter low > 60
Escherichia coli Nissle 1917 0.69 ECOLIN_RS10040 long-chain-fatty-acid--CoA ligase FadD 0.25 ECOLIN_RS13565 long-chain fatty acid transporter FadL — —
Escherichia coli BW25113 0.69 b1805 fadD acyl-CoA synthase (NCBI) 0.25 b2344 fadL long-chain fatty acid outer membrane transporter (RefSeq) 0.65 1
Escherichia coli ECRC62 0.69 BNILDI_15900 fadD long-chain-fatty-acid--CoA ligase FadD 0.25 BNILDI_13095 fadL long-chain fatty acid transporter FadL — —
Escherichia fergusonii Becca 0.69 EFB2_02195 Long-chain-fatty-acid--CoA ligase 0.25 EFB2_01515 Long-chain fatty acid transport protein low > 86
Enterobacter sp. TBS_079 0.69 MPMX20_02711 Long-chain-fatty-acid--CoA ligase 0.26 MPMX20_03271 Long-chain fatty acid transport protein 0.26 6
Dickeya dianthicola 67-19 0.69 HGI48_RS11260 long-chain-fatty-acid--CoA ligase FadD 0.27 HGI48_RS14565 long-chain fatty acid transporter FadL low > 71
Escherichia coli ECRC98 0.69 JDDGAC_01170 fadD long-chain-fatty-acid--CoA ligase FadD 0.24 JDDGAC_26505 fadL long-chain fatty acid transporter FadL — —
Dickeya dianthicola ME23 0.69 DZA65_RS11605 long-chain-fatty-acid--CoA ligase FadD 0.27 DZA65_RS15505 long-chain fatty acid transporter FadL low > 75
Escherichia coli ECRC102 0.69 NIAGMN_01470 fadD long-chain-fatty-acid--CoA ligase FadD 0.24 NIAGMN_20320 fadL long-chain fatty acid transporter FadL — —
Escherichia coli ECRC101 0.69 MCAODC_18815 fadD long-chain-fatty-acid--CoA ligase FadD 0.24 MCAODC_13575 fadL long-chain fatty acid transporter FadL — —
Escherichia coli ECRC101 0.69 OKFHMN_26595 fadD long-chain-fatty-acid--CoA ligase FadD 0.24 OKFHMN_22545 fadL long-chain fatty acid transporter FadL — —
Escherichia coli ECRC99 0.69 KEDOAH_01515 fadD long-chain-fatty-acid--CoA ligase FadD 0.24 KEDOAH_05650 fadL long-chain fatty acid transporter FadL — —
Pectobacterium carotovorum WPP14 0.68 HER17_RS11275 long-chain-fatty-acid--CoA ligase FadD 0.27 HER17_RS06875 long-chain fatty acid transporter FadL low > 75
Enterobacter asburiae PDN3 0.68 EX28DRAFT_0753 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 0.26 EX28DRAFT_0268 Long-chain fatty acid transport protein low > 76
Klebsiella michiganensis M5al 0.68 BWI76_RS17800 long-chain-fatty-acid--CoA ligase 0.26 BWI76_RS20470 long-chain fatty acid transporter 0.31 6
Pantoea sp. MT58 0.68 IAI47_08835 long-chain-fatty-acid--CoA ligase FadD 0.25 IAI47_06115 long-chain fatty acid transporter FadL low > 76
Pseudomonas stutzeri RCH2 0.53 Psest_1334 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 0.21 Psest_2997 Long-chain fatty acid transport protein low > 67

Not shown: 59 genomes with orthologs for Shew_2188 only; 2 genomes with orthologs for Shew_2436 only