Conservation of cofitness between Shew_2455 and Shew_1524 in Shewanella loihica PV-4

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella loihica PV-4 1.0 Shew_2455 peptidase M23B (RefSeq) 1.0 Shew_1524 MotA/TolQ/ExbB proton channel (RefSeq) 0.43 18
Shewanella sp. ANA-3 0.68 Shewana3_2610 peptidase M23B (RefSeq) 0.83 Shewana3_2534 MotA/TolQ/ExbB proton channel (RefSeq) — —
Shewanella oneidensis MR-1 0.68 SO2842 peptidase, M23/M37 family (NCBI ptt file) 0.84 SO2751 MotA/TolQ/ExbB proton channel family protein (NCBI ptt file) — —
Shewanella amazonensis SB2B 0.66 Sama_1269 M24/M37 family peptidase (RefSeq) 0.74 Sama_2089 MotA/TolQ/ExbB proton channel (RefSeq) — —
Vibrio cholerae E7946 ATCC 55056 0.45 CSW01_14420 peptidase M23 0.64 CSW01_09210 protein TolQ — —
Pantoea sp. MT58 0.30 IAI47_08470 murein DD-endopeptidase MepM 0.65 IAI47_13700 Tol-Pal system protein TolQ low > 76
Rahnella sp. WP5 0.29 EX31_RS10670 murein DD-endopeptidase MepM 0.64 EX31_RS23480 Tol-Pal system protein TolQ low > 89
Serratia liquefaciens MT49 0.28 IAI46_14600 murein DD-endopeptidase MepM 0.65 IAI46_06320 Tol-Pal system protein TolQ — —
Erwinia amylovora T8 0.28 OLJFJH_12880 murein DD-endopeptidase MepM 0.65 OLJFJH_16925 Tol-Pal system protein TolQ — —
Pectobacterium carotovorum WPP14 0.28 HER17_RS11800 murein DD-endopeptidase MepM 0.65 HER17_RS14880 Tol-Pal system protein TolQ low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.27 OHPLBJKB_01872 Murein DD-endopeptidase MepM 0.63 OHPLBJKB_02976 Protein TolQ low > 73
Escherichia coli ECRC98 0.27 JDDGAC_00885 mepM murein DD-endopeptidase MepM 0.63 JDDGAC_10475 tolQ Tol-Pal system protein TolQ low > 86
Escherichia coli BW25113 0.27 b1856 yebA orf, hypothetical protein (VIMSS) 0.63 b0737 tolQ membrane spanning protein in TolA-TolQ-TolR complex (NCBI) low > 76
Escherichia coli ECOR27 0.27 NOLOHH_16750 mepM murein DD-endopeptidase MepM 0.63 NOLOHH_23255 tolQ Tol-Pal system protein TolQ — —
Escherichia coli Nissle 1917 0.27 ECOLIN_RS10340 murein DD-endopeptidase MepM 0.63 ECOLIN_RS03925 Tol-Pal system protein TolQ — —
Escherichia coli ECRC101 0.27 MCAODC_19095 mepM murein DD-endopeptidase MepM 0.63 MCAODC_26040 tolQ Tol-Pal system protein TolQ low > 87
Escherichia coli ECRC102 0.27 NIAGMN_01750 mepM murein DD-endopeptidase MepM 0.63 NIAGMN_04870 tolQ Tol-Pal system protein TolQ — —
Escherichia coli ECRC99 0.27 KEDOAH_01795 mepM murein DD-endopeptidase MepM 0.63 KEDOAH_21145 tolQ Tol-Pal system protein TolQ — —
Escherichia coli ECRC62 0.27 BNILDI_15540 mepM murein DD-endopeptidase MepM 0.63 BNILDI_21250 tolQ Tol-Pal system protein TolQ low > 75
Escherichia fergusonii Becca 0.27 EFB2_02086 Murein DD-endopeptidase MepM 0.63 EFB2_03369 Tol-Pal system protein TolQ low > 86
Escherichia coli ECRC100 0.27 OKFHMN_26310 mepM murein DD-endopeptidase MepM 0.63 OKFHMN_06820 tolQ Tol-Pal system protein TolQ — —
Escherichia coli BL21 0.27 ECD_01827 murein DD-endopeptidase, space-maker hydrolase, septation protein 0.63 ECD_00697 membrane spanning protein in TolA-TolQ-TolR complex — —
Escherichia coli ECOR38 0.27 HEPCGN_04715 mepM murein DD-endopeptidase MepM 0.63 HEPCGN_01450 tolQ Tol-Pal system protein TolQ low > 87
Enterobacter asburiae PDN3 0.26 EX28DRAFT_0700 Membrane proteins related to metalloendopeptidases 0.66 EX28DRAFT_2254 TolQ protein — —
Enterobacter sp. TBS_079 0.26 MPMX20_02761 Murein DD-endopeptidase MepM 0.65 MPMX20_01366 Tol-Pal system protein TolQ low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.26 GFF1635 Cell wall endopeptidase, family M23/M37 0.63 GFF4651 MotA/TolQ/ExbB proton channel family protein — —
Klebsiella michiganensis M5al 0.26 BWI76_RS18125 murein DD-endopeptidase MepM 0.65 BWI76_RS08520 colicin transporter TolQ low > 92

Not shown: 0 genomes with orthologs for Shew_2455 only; 70 genomes with orthologs for Shew_1524 only