Conservation of cofitness between BT1529 and BT4651 in Bacteroides thetaiotaomicron VPI-5482

17 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bacteroides thetaiotaomicron VPI-5482 1.0 BT1529 two-component system response regulator (NCBI ptt file) 1.0 BT4651 endonuclease IV (NCBI ptt file) 0.29 13
Bacteroides ovatus ATCC 8483 0.93 BACOVA_04264 Sigma-54 interaction domain protein 0.92 BACOVA_05467 apurinic endonuclease (APN1) low > 94
Bacteroides stercoris CC31F 0.87 HMPREF1181_RS04840 sigma-54-dependent Fis family transcriptional regulator 0.81 HMPREF1181_RS13745 deoxyribonuclease IV low > 56
Phocaeicola dorei CL03T12C01 0.80 ABI39_RS11790 sigma-54-dependent Fis family transcriptional regulator 0.76 ABI39_RS12215 deoxyribonuclease IV low > 72
Phocaeicola vulgatus CL09T03C04 0.79 HMPREF1058_RS15800 sigma-54-dependent Fis family transcriptional regulator 0.78 HMPREF1058_RS16375 deoxyribonuclease IV low > 67
Parabacteroides merdae CL09T00C40 0.73 HMPREF1078_RS14460 sigma-54 dependent transcriptional regulator 0.69 HMPREF1078_RS08540 deoxyribonuclease IV low > 61
Rahnella sp. WP5 0.40 EX31_RS02520 sigma-54-dependent Fis family transcriptional regulator 0.64 EX31_RS19060 deoxyribonuclease IV low > 89
Escherichia fergusonii Becca 0.38 EFB2_01635 Regulatory protein AtoC 0.65 EFB2_01697 Endonuclease 4 low > 86
Escherichia coli Nissle 1917 0.38 ECOLIN_RS12965 acetoacetate metabolism transcriptional regulator AtoC 0.65 ECOLIN_RS12640 deoxyribonuclease IV — —
Escherichia coli ECOR38 0.38 HEPCGN_22430 atoC acetoacetate metabolism transcriptional regulator AtoC 0.65 HEPCGN_22750 nfo deoxyribonuclease IV low > 85
Escherichia coli BL21 0.38 ECD_02147 fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein 0.64 ECD_02088 endonuclease IV with intrinsic 3'-5' exonuclease activity low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.38 OHPLBJKB_01490 Regulatory protein AtoC 0.64 OHPLBJKB_01552 Endonuclease 4 low > 73
Escherichia coli BW25113 0.38 b2220 atoC fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein (NCBI) 0.65 b2159 nfo endonuclease IV (NCBI) low > 76
Desulfovibrio vulgaris Hildenborough JW710 0.38 DVU3220 atoC sigma-54 dependent transcriptional regulator/response regulator (TIGR) 0.31 DVU1224 nfo endonuclease IV (TIGR) — —
Desulfovibrio vulgaris Miyazaki F 0.37 DvMF_0823 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) 0.28 DvMF_0897 apurinic endonuclease Apn1 (RefSeq) low > 51
Shewanella loihica PV-4 0.35 Shew_0726 two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) 0.62 Shew_1083 apurinic endonuclease Apn1 (RefSeq) low > 60
Enterobacter sp. TBS_079 0.33 MPMX20_04597 DNA-binding transcriptional regulator NtrC 0.62 MPMX20_03130 Endonuclease 4 low > 85
Vibrio cholerae E7946 ATCC 55056 0.33 CSW01_13865 nitrogen regulation protein NR(I) 0.64 CSW01_11955 endonuclease low > 62

Not shown: 35 genomes with orthologs for BT1529 only; 19 genomes with orthologs for BT4651 only