Conservation of cofitness between SO3423 and SO0694 in Shewanella oneidensis MR-1

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella oneidensis MR-1 1.0 SO3423 holC DNA polymerase III, chi subunit (NCBI ptt file) 1.0 SO0694 galK galactokinase (NCBI ptt file) 0.41 10
Shewanella sp. ANA-3 0.94 Shewana3_1132 DNA polymerase III chi subunit, HolC (RefSeq) 0.96 Shewana3_3578 galactokinase (RefSeq) — —
Shewanella loihica PV-4 0.64 Shew_0924 DNA polymerase III chi subunit, HolC (RefSeq) 0.69 Shew_3271 galactokinase (RefSeq) — —
Shewanella amazonensis SB2B 0.60 Sama_0791 DNA polymerase III, chi subunit (RefSeq) 0.67 Sama_0536 galactokinase (RefSeq) low > 62
Pectobacterium carotovorum WPP14 0.39 HER17_RS19455 DNA polymerase III subunit chi 0.39 HER17_RS06390 galactokinase — —
Dickeya dianthicola ME23 0.38 DZA65_RS02055 DNA polymerase III subunit chi 0.41 DZA65_RS06980 galactokinase — —
Dickeya dadantii 3937 0.38 DDA3937_RS01990 DNA polymerase III subunit chi 0.40 DDA3937_RS06605 galactokinase — —
Rahnella sp. WP5 0.36 EX31_RS04390 DNA polymerase III subunit chi 0.40 EX31_RS23570 galactokinase low > 89
Pantoea sp. MT58 0.36 IAI47_16800 DNA polymerase III subunit chi 0.41 IAI47_13590 galactokinase — —
Escherichia coli BW25113 0.35 b4259 holC DNA polymerase III subunit chi (NCBI) 0.41 b0757 galK galactokinase GalK (EC 2.7.1.6) (from data) — —
Escherichia fergusonii Becca 0.35 EFB2_04276 DNA polymerase III subunit chi 0.41 EFB2_03349 Galactokinase low > 86
Dickeya dianthicola 67-19 0.35 HGI48_RS01950 DNA polymerase III subunit chi 0.41 HGI48_RS06625 galactokinase — —
Escherichia coli ECRC101 0.35 MCAODC_02315 holC DNA polymerase III subunit chi 0.41 MCAODC_25945 galK galactokinase — —
Enterobacter sp. TBS_079 0.35 MPMX20_04119 DNA polymerase III subunit chi 0.41 MPMX20_01384 Galactokinase low > 85
Escherichia coli ECRC102 0.35 NIAGMN_09660 holC DNA polymerase III subunit chi 0.41 NIAGMN_04775 galK galactokinase — —
Escherichia coli ECRC101 0.35 OKFHMN_11810 holC DNA polymerase III subunit chi 0.41 OKFHMN_06725 galK galactokinase — —
Escherichia coli ECOR38 0.35 HEPCGN_10000 holC DNA polymerase III subunit chi 0.41 HEPCGN_01550 galK galactokinase — —
Escherichia coli ECRC98 0.35 JDDGAC_15450 holC DNA polymerase III subunit chi 0.41 JDDGAC_10380 galK galactokinase — —
Escherichia coli ECRC99 0.35 KEDOAH_16345 holC DNA polymerase III subunit chi 0.41 KEDOAH_21240 galK galactokinase — —
Enterobacter asburiae PDN3 0.35 EX28DRAFT_3268 DNA polymerase III, chi subunit (EC 2.7.7.7) 0.40 EX28DRAFT_2238 galactokinase — —
Escherichia coli ECOR27 0.35 NOLOHH_04065 holC DNA polymerase III subunit chi 0.41 NOLOHH_23155 galK galactokinase low > 57
Escherichia coli ECRC62 0.35 BNILDI_07450 holC DNA polymerase III subunit chi 0.41 BNILDI_21150 galK galactokinase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.35 OHPLBJKB_03777 DNA polymerase III subunit chi 0.41 OHPLBJKB_02956 Galactokinase low > 73
Escherichia coli Nissle 1917 0.35 ECOLIN_RS24690 DNA polymerase III subunit chi 0.41 ECOLIN_RS04030 galactokinase — —
Klebsiella michiganensis M5al 0.34 BWI76_RS03035 DNA polymerase III subunit chi 0.41 BWI76_RS08615 galactokinase — —
Serratia liquefaciens MT49 0.34 IAI46_02355 DNA polymerase III subunit chi 0.38 IAI46_06425 galactokinase — —
Erwinia tracheiphila SCR3 0.34 LU632_RS20860 DNA polymerase III subunit chi 0.42 LU632_RS15910 galK galactokinase — —
Vibrio cholerae E7946 ATCC 55056 0.34 CSW01_12685 DNA polymerase III subunit chi 0.43 CSW01_08000 galactokinase low > 62
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.34 GFF948 DNA polymerase III chi subunit (EC 2.7.7.7) 0.41 GFF650 Galactokinase (EC 2.7.1.6) low > 78
Alteromonas macleodii MIT1002 0.28 MIT1002_03196 DNA polymerase III subunit chi 0.36 MIT1002_00189 Galactokinase — —

Not shown: 28 genomes with orthologs for SO3423 only; 12 genomes with orthologs for SO0694 only