Conservation of cofitness between b3646 and b1831 in Escherichia coli BW25113

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3646 yicG orf, hypothetical protein (VIMSS) 1.0 b1831 proQ putative solute/DNA competence effector (NCBI) 0.24 9
Escherichia coli ECOR27 1.00 NOLOHH_07455 yicG UPF0126 inner membrane protein YicG 1.00 NOLOHH_16970 proQ RNA chaperone ProQ low > 57
Escherichia coli Nissle 1917 1.00 ECOLIN_RS20770 trimeric intracellular cation channel family protein 0.99 ECOLIN_RS10195 RNA chaperone ProQ low > 52
Escherichia coli BL21 1.00 ECD_03503 UPF0126 family inner membrane protein 1.00 ECD_01802 RNA chaperone, putative ProP translation regulator low > 60
Escherichia coli ECRC98 1.00 JDDGAC_19200 yicG UPF0126 inner membrane protein YicG 0.99 JDDGAC_01035 proQ RNA chaperone ProQ — —
Escherichia coli ECRC101 1.00 OKFHMN_15575 yicG UPF0126 inner membrane protein YicG 0.99 OKFHMN_26460 proQ RNA chaperone ProQ — —
Escherichia fergusonii Becca 1.00 EFB2_00142 hypothetical protein 0.99 EFB2_02170 RNA chaperone ProQ low > 86
Escherichia coli ECRC99 1.00 KEDOAH_12570 yicG UPF0126 inner membrane protein YicG 0.99 KEDOAH_01645 proQ RNA chaperone ProQ — —
Escherichia coli ECRC62 1.00 BNILDI_04060 yicG UPF0126 inner membrane protein YicG 1.00 BNILDI_15765 proQ RNA chaperone ProQ — —
Escherichia coli ECRC101 1.00 MCAODC_06085 yicG UPF0126 inner membrane protein YicG 0.99 MCAODC_18945 proQ RNA chaperone ProQ — —
Escherichia coli ECOR38 1.00 HEPCGN_14395 yicG UPF0126 inner membrane protein YicG 0.99 HEPCGN_04860 proQ RNA chaperone ProQ low > 85
Escherichia coli ECRC102 1.00 NIAGMN_13335 yicG UPF0126 inner membrane protein YicG 0.99 NIAGMN_01600 proQ RNA chaperone ProQ — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00055 hypothetical protein 1.00 OHPLBJKB_01900 RNA chaperone ProQ low > 73
Enterobacter asburiae PDN3 0.93 EX28DRAFT_3895 Predicted membrane protein 0.83 EX28DRAFT_0725 Activator of osmoprotectant transporter ProP low > 76
Klebsiella michiganensis M5al 0.91 BWI76_RS27405 membrane protein 0.77 BWI76_RS17980 RNA chaperone ProQ low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.89 GFF362 Putative inner membrane protein 0.84 GFF2846 ProQ: influences osmotic activation of compatible solute ProP low > 78
Enterobacter sp. TBS_079 0.84 MPMX20_00090 hypothetical protein 0.84 MPMX20_02738 RNA chaperone ProQ low > 85
Pantoea sp. MT58 0.77 IAI47_00530 trimeric intracellular cation channel family protein 0.68 IAI47_08700 RNA chaperone ProQ low > 76
Serratia liquefaciens MT49 0.72 IAI46_24875 trimeric intracellular cation channel family protein 0.70 IAI46_10795 RNA chaperone ProQ low > 86
Rahnella sp. WP5 0.71 EX31_RS15790 trimeric intracellular cation channel family protein 0.66 EX31_RS24875 RNA chaperone ProQ low > 89
Shewanella oneidensis MR-1 0.56 SO3342 putative transporter, required for L-alanine utilization (from data) 0.36 SO2602 hypothetical Activator of ProP osmoprotectant transporter (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.55 Shewana3_1204 putative transporter, required for glycine and L-alanine utilization (from data) 0.33 Shewana3_1777 putative solute/DNA competence effector (RefSeq) low > 73
Vibrio cholerae E7946 ATCC 55056 0.55 CSW01_10555 hypothetical protein 0.48 CSW01_07520 RNA chaperone ProQ low > 62
Dickeya dianthicola 67-19 0.52 HGI48_RS10325 trimeric intracellular cation channel family protein 0.66 HGI48_RS12060 RNA chaperone ProQ low > 71
Dickeya dadantii 3937 0.52 DDA3937_RS10315 trimeric intracellular cation channel family protein 0.66 DDA3937_RS11970 RNA chaperone ProQ low > 74
Dickeya dianthicola ME23 0.52 DZA65_RS10800 trimeric intracellular cation channel family protein 0.66 DZA65_RS12510 RNA chaperone ProQ — —
Pectobacterium carotovorum WPP14 0.51 HER17_RS11080 trimeric intracellular cation channel family protein 0.61 HER17_RS11695 RNA chaperone ProQ low > 75
Shewanella loihica PV-4 0.50 Shew_1154 hypothetical protein (RefSeq) 0.36 Shew_1801 putative solute/DNA competence effector (RefSeq) low > 60
Shewanella amazonensis SB2B 0.44 Sama_2463 hypothetical protein (RefSeq) 0.38 Sama_1584 putative solute/DNA competence effector (RefSeq) — —

Not shown: 38 genomes with orthologs for b3646 only; 2 genomes with orthologs for b1831 only