Conservation of cofitness between b3198 and b1831 in Escherichia coli BW25113

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3198 kdsC 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (NCBI) 1.0 b1831 proQ putative solute/DNA competence effector (NCBI) 0.35 13
Escherichia coli ECRC102 1.00 NIAGMN_15720 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.99 NIAGMN_01600 proQ RNA chaperone ProQ — —
Escherichia coli ECRC99 1.00 KEDOAH_10190 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.99 KEDOAH_01645 proQ RNA chaperone ProQ — —
Escherichia coli ECRC101 1.00 OKFHMN_17960 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.99 OKFHMN_26460 proQ RNA chaperone ProQ — —
Escherichia coli ECOR27 1.00 NOLOHH_09760 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC 1.00 NOLOHH_16970 proQ RNA chaperone ProQ low > 57
Escherichia coli ECRC98 1.00 JDDGAC_21585 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.99 JDDGAC_01035 proQ RNA chaperone ProQ — —
Escherichia coli ECOR38 1.00 HEPCGN_16835 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.99 HEPCGN_04860 proQ RNA chaperone ProQ low > 85
Escherichia coli ECRC101 1.00 MCAODC_08480 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.99 MCAODC_18945 proQ RNA chaperone ProQ — —
Escherichia coli ECRC62 1.00 BNILDI_01775 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC 1.00 BNILDI_15765 proQ RNA chaperone ProQ — —
Escherichia coli BL21 1.00 ECD_03063 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 1.00 ECD_01802 RNA chaperone, putative ProP translation regulator low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00502 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC 1.00 OHPLBJKB_01900 RNA chaperone ProQ low > 73
Escherichia coli Nissle 1917 1.00 ECOLIN_RS18405 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.99 ECOLIN_RS10195 RNA chaperone ProQ low > 52
Escherichia fergusonii Becca 1.00 EFB2_00625 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC 0.99 EFB2_02170 RNA chaperone ProQ low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.97 GFF2942 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) 0.84 GFF2846 ProQ: influences osmotic activation of compatible solute ProP low > 78
Enterobacter asburiae PDN3 0.92 EX28DRAFT_3252 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 0.83 EX28DRAFT_0725 Activator of osmoprotectant transporter ProP low > 76
Enterobacter sp. TBS_079 0.91 MPMX20_04104 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC 0.84 MPMX20_02738 RNA chaperone ProQ low > 85
Klebsiella michiganensis M5al 0.85 BWI76_RS25245 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 0.77 BWI76_RS17980 RNA chaperone ProQ low > 92
Pantoea sp. MT58 0.82 IAI47_17165 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.68 IAI47_08700 RNA chaperone ProQ 0.49 46
Pectobacterium carotovorum WPP14 0.79 HER17_RS20040 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.61 HER17_RS11695 RNA chaperone ProQ low > 75
Erwinia tracheiphila SCR3 0.79 LU632_RS21260 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.65 LU632_RS13255 proQ RNA chaperone ProQ low > 74
Rahnella sp. WP5 0.78 EX31_RS12420 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.66 EX31_RS24875 RNA chaperone ProQ low > 89
Serratia liquefaciens MT49 0.77 IAI46_22450 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.70 IAI46_10795 RNA chaperone ProQ low > 86
Dickeya dianthicola 67-19 0.77 HGI48_RS01465 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.66 HGI48_RS12060 RNA chaperone ProQ low > 71
Dickeya dianthicola ME23 0.77 DZA65_RS01530 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.66 DZA65_RS12510 RNA chaperone ProQ — —
Dickeya dadantii 3937 0.76 DDA3937_RS01550 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.66 DDA3937_RS11970 RNA chaperone ProQ low > 74
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_12795 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.48 CSW01_07520 RNA chaperone ProQ — —
Shewanella loihica PV-4 0.59 Shew_3307 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (RefSeq) 0.36 Shew_1801 putative solute/DNA competence effector (RefSeq) — —
Shewanella amazonensis SB2B 0.53 Sama_3084 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (RefSeq) 0.38 Sama_1584 putative solute/DNA competence effector (RefSeq) — —
Shewanella sp. ANA-3 0.52 Shewana3_0676 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (RefSeq) 0.33 Shewana3_1777 putative solute/DNA competence effector (RefSeq) — —
Shewanella oneidensis MR-1 0.52 SO3957 conserved hypothetical protein (NCBI ptt file) 0.36 SO2602 hypothetical Activator of ProP osmoprotectant transporter (NCBI ptt file) — —
Alteromonas macleodii MIT1002 0.46 MIT1002_00831 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC 0.35 MIT1002_02024 ProP effector — —

Not shown: 52 genomes with orthologs for b3198 only; 0 genomes with orthologs for b1831 only