Conservation of cofitness between b3092 and b1521 in Escherichia coli BW25113

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3092 uxaC glucuronate isomerase (NCBI) 1.0 b1521 uxaB tagaturonate reductase (NCBI) 0.35 8
Escherichia coli Nissle 1917 1.00 ECOLIN_RS17830 glucuronate isomerase 0.99 ECOLIN_RS08690 tagaturonate reductase low > 52
Escherichia fergusonii Becca 1.00 EFB2_00720 Uronate isomerase 1.00 EFB2_02439 Altronate oxidoreductase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00610 Uronate isomerase 1.00 OHPLBJKB_02198 Altronate oxidoreductase low > 73
Escherichia coli BL21 1.00 ECD_02961 uronate isomerase 1.00 ECD_01478 altronate oxidoreductase, NAD-dependent low > 60
Escherichia coli ECOR38 1.00 HEPCGN_17375 uxaC glucuronate isomerase 0.99 HEPCGN_26630 uxaB tagaturonate reductase low > 85
Escherichia coli ECRC101 1.00 OKFHMN_18520 uxaC glucuronate isomerase 1.00 OKFHMN_01130 uxaB tagaturonate reductase — —
Escherichia coli ECRC99 1.00 KEDOAH_09625 uxaC glucuronate isomerase 1.00 KEDOAH_27300 uxaB tagaturonate reductase — —
Escherichia coli ECOR27 1.00 NOLOHH_10320 uxaC glucuronate isomerase 1.00 NOLOHH_18780 uxaB tagaturonate reductase — —
Escherichia coli ECRC101 1.00 MCAODC_09035 uxaC glucuronate isomerase 1.00 MCAODC_16795 uxaB tagaturonate reductase — —
Escherichia coli ECRC98 1.00 JDDGAC_22155 uxaC glucuronate isomerase 1.00 JDDGAC_03640 uxaB tagaturonate reductase — —
Escherichia coli ECRC62 1.00 BNILDI_01195 uxaC glucuronate isomerase 0.99 BNILDI_17260 uxaB tagaturonate reductase — —
Escherichia coli ECRC102 1.00 NIAGMN_16285 uxaC glucuronate isomerase 1.00 NIAGMN_25275 uxaB tagaturonate reductase — —
Klebsiella michiganensis M5al 0.97 BWI76_RS24730 uronate isomerase 0.90 BWI76_RS15180 altronate oxidoreductase low > 92
Enterobacter sp. TBS_079 0.96 MPMX20_04001 Uronate isomerase 0.89 MPMX20_02276 Altronate oxidoreductase low > 85
Enterobacter asburiae PDN3 0.95 EX28DRAFT_3160 Glucuronate isomerase 0.89 EX28DRAFT_1191 Mannitol-1-phosphate/altronate dehydrogenases low > 76
Pectobacterium carotovorum WPP14 0.91 HER17_RS18715 glucuronate isomerase 0.75 HER17_RS18710 tagaturonate reductase 0.80 15
Dickeya dadantii 3937 0.89 DDA3937_RS02825 glucuronate isomerase 0.74 DDA3937_RS02830 tagaturonate reductase 0.45 36
Dickeya dianthicola ME23 0.89 DZA65_RS02965 glucuronate isomerase 0.74 DZA65_RS02975 tagaturonate reductase 0.61 17
Dickeya dianthicola 67-19 0.89 HGI48_RS02800 glucuronate isomerase 0.74 HGI48_RS02805 tagaturonate reductase low > 71
Rahnella sp. WP5 0.84 EX31_RS12675 glucuronate isomerase 0.72 EX31_RS12680 tagaturonate reductase low > 89
Pantoea sp. MT58 0.80 IAI47_02910 glucuronate isomerase 0.58 IAI47_02915 tagaturonate reductase low > 76
Phocaeicola dorei CL03T12C01 0.56 ABI39_RS15475 glucuronate isomerase 0.42 ABI39_RS15480 tagaturonate reductase 0.94 1
Phocaeicola vulgatus CL09T03C04 0.56 HMPREF1058_RS01590 glucuronate isomerase 0.42 HMPREF1058_RS01585 tagaturonate reductase 0.93 1
Bacteroides thetaiotaomicron VPI-5482 0.55 BT_0823 glucuronate isomerase (RefSeq) 0.41 BT0825 altronate oxidoreductase (NCBI ptt file) 0.45 6
Bacteroides ovatus ATCC 8483 0.55 BACOVA_02558 glucuronate isomerase 0.42 BACOVA_02560 mannitol dehydrogenase domain protein 0.96 1
Mucilaginibacter yixingensis YX-36 DSM 26809 0.55 ABZR88_RS16135 glucuronate isomerase 0.28 ABZR88_RS10495 tagaturonate reductase low > 71
Bacteroides stercoris CC31F 0.55 HMPREF1181_RS14420 glucuronate isomerase 0.39 HMPREF1181_RS14410 tagaturonate reductase 0.98 2
Echinicola vietnamensis KMM 6221, DSM 17526 0.52 Echvi_3072 Glucuronate isomerase 0.44 Echvi_3071 Mannitol-1-phosphate/altronate dehydrogenases 0.42 28
Parabacteroides merdae CL09T00C40 0.52 HMPREF1078_RS05615 glucuronate isomerase 0.39 HMPREF1078_RS05895 tagaturonate reductase low > 61
Pedobacter sp. GW460-11-11-14-LB5 0.51 CA265_RS19870 Glucuronate isomerase (EC 5.3.1.12) (from data) 0.28 CA265_RS19880 Altronate oxidoreductase (EC 1.1.1.58) (from data) 0.91 2
Azospirillum sp. SherDot2 0.16 MPMX19_05792 Uronate isomerase 0.39 MPMX19_04852 Altronate oxidoreductase low > 112
Azospirillum brasilense Sp245 0.16 AZOBR_RS31425 glucuronate isomerase 0.40 AZOBR_RS16160 altronate oxidoreductase low > 97

Not shown: 13 genomes with orthologs for b3092 only; 0 genomes with orthologs for b1521 only