Conservation of cofitness between b3115 and b4053 in Escherichia coli BW25113

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3115 tdcD propionate kinase/acetate kinase C, anaerobic (RefSeq) 1.0 b4053 alr alanine racemase (NCBI) 0.50 3
Escherichia coli BL21 1.00 ECD_02982 propionate kinase/acetate kinase C, anaerobic 1.00 ECD_03925 alanine racemase, biosynthetic, PLP-binding low > 60
Escherichia coli ECOR38 1.00 HEPCGN_17245 tdcD propionate kinase 1.00 HEPCGN_11540 alr alanine racemase low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00585 Propionate kinase 1.00 OHPLBJKB_03990 Alanine racemase, biosynthetic low > 73
Escherichia coli ECRC62 1.00 BNILDI_01335 tdcD propionate kinase 1.00 BNILDI_06350 alr alanine racemase — —
Escherichia coli ECOR27 1.00 NOLOHH_10190 tdcD propionate kinase 1.00 NOLOHH_05175 alr alanine racemase low > 57
Escherichia coli ECRC99 0.99 KEDOAH_09735 tdcD propionate kinase 1.00 KEDOAH_15225 alr alanine racemase — —
Escherichia coli ECRC102 0.99 NIAGMN_16175 tdcD propionate kinase 1.00 NIAGMN_10770 alr alanine racemase — —
Escherichia coli ECRC101 0.99 OKFHMN_18410 tdcD propionate kinase 1.00 OKFHMN_12925 alr alanine racemase — —
Escherichia coli ECRC101 0.99 MCAODC_08925 tdcD propionate kinase 1.00 MCAODC_03435 alr alanine racemase — —
Escherichia coli ECRC98 0.99 JDDGAC_22045 tdcD propionate kinase 1.00 JDDGAC_16560 alr alanine racemase — —
Escherichia fergusonii Becca 0.99 EFB2_00699 Propionate kinase 1.00 EFB2_04547 Alanine racemase, biosynthetic low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS17930 propionate kinase 0.94 ECOLIN_RS23405 alanine racemase low > 52
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.85 GFF3208 Acetate kinase (EC 2.7.2.1) 0.92 GFF1422 Alanine racemase (EC 5.1.1.1) low > 78
Enterobacter sp. TBS_079 0.80 MPMX20_04019 Propionate kinase 0.90 MPMX20_00269 Alanine racemase, biosynthetic low > 85
Enterobacter asburiae PDN3 0.80 EX28DRAFT_3176 acetate kinase 0.90 EX28DRAFT_4259 alanine racemase low > 76
Synechococcus elongatus PCC 7942 0.31 Synpcc7942_2079 ackA acetate kinase 0.23 Synpcc7942_2201 alr alanine racemase — —
Magnetospirillum magneticum AMB-1 0.31 AMB_RS12860 acetate/propionate family kinase 0.17 AMB_RS10575 alanine racemase — —
Azospirillum brasilense Sp245 0.31 AZOBR_RS12495 acetate kinase 0.20 AZOBR_RS08350 alanine racemase — —
Rhodopseudomonas palustris CGA009 0.30 TX73_023720 acetate/propionate family kinase 0.21 TX73_015960 alanine racemase — —
Dinoroseobacter shibae DFL-12 0.29 Dshi_0632 acetate kinase (RefSeq) 0.21 Dshi_2378 alanine racemase (RefSeq) low > 64
Rhodanobacter denitrificans MT42 0.29 LRK55_RS17635 acetate/propionate family kinase 0.40 LRK55_RS00355 alanine racemase — —
Dyella japonica UNC79MFTsu3.2 0.28 ABZR86_RS04300 acetate/propionate family kinase 0.37 ABZR86_RS08850 alanine racemase — —
Phaeobacter inhibens DSM 17395 0.27 PGA1_c28840 acetate kinase AckA 0.21 PGA1_c10880 alanine racemase, biosynthetic low > 62
Kangiella aquimarina DSM 16071 0.22 B158DRAFT_1675 Acetate kinase 0.46 B158DRAFT_2013 alanine racemase low > 40
Sphingomonas koreensis DSMZ 15582 0.19 Ga0059261_2551 Acetate kinase 0.15 Ga0059261_0986 alanine racemase — —

Not shown: 22 genomes with orthologs for b3115 only; 26 genomes with orthologs for b4053 only