Conservation of cofitness between b0237 and b3616 in Escherichia coli BW25113

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0237 pepD aminoacyl-histidine dipeptidase (peptidase D) (NCBI) 1.0 b3616 tdh L-threonine 3-dehydrogenase (NCBI) 0.33 8
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03403 Cytosol non-specific dipeptidase 1.00 OHPLBJKB_00083 L-threonine 3-dehydrogenase low > 73
Escherichia coli ECOR27 1.00 NOLOHH_02075 pepD cytosol nonspecific dipeptidase 1.00 NOLOHH_07595 tdh L-threonine 3-dehydrogenase low > 57
Escherichia coli ECRC62 1.00 BNILDI_00270 pepD cytosol nonspecific dipeptidase 0.99 BNILDI_03920 tdh L-threonine 3-dehydrogenase — —
Escherichia coli ECRC99 0.99 KEDOAH_18455 pepD cytosol nonspecific dipeptidase 0.99 KEDOAH_12435 tdh L-threonine 3-dehydrogenase — —
Escherichia coli ECRC102 0.99 NIAGMN_07560 pepD cytosol nonspecific dipeptidase 0.99 NIAGMN_13475 tdh L-threonine 3-dehydrogenase — —
Escherichia coli ECOR38 0.99 HEPCGN_07805 pepD cytosol nonspecific dipeptidase 1.00 HEPCGN_14555 tdh L-threonine 3-dehydrogenase low > 85
Escherichia coli ECRC101 0.99 MCAODC_00220 pepD cytosol nonspecific dipeptidase 0.99 MCAODC_06225 tdh L-threonine 3-dehydrogenase — —
Escherichia coli ECRC98 0.99 JDDGAC_13325 pepD cytosol nonspecific dipeptidase 0.99 JDDGAC_19340 tdh L-threonine 3-dehydrogenase — —
Escherichia coli ECRC101 0.99 OKFHMN_09700 pepD cytosol nonspecific dipeptidase 0.99 OKFHMN_15715 tdh L-threonine 3-dehydrogenase — —
Escherichia coli BL21 0.99 ECD_00232 aminoacyl-histidine dipeptidase (peptidase D) 1.00 ECD_03474 L-threonine 3-dehydrogenase, NAD(P)-binding low > 60
Escherichia fergusonii Becca 0.99 EFB2_03783 Cytosol non-specific dipeptidase 1.00 EFB2_00194 L-threonine 3-dehydrogenase low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS01800 cytosol nonspecific dipeptidase 1.00 ECOLIN_RS20635 L-threonine 3-dehydrogenase low > 52
Klebsiella michiganensis M5al 0.93 BWI76_RS05540 cytosol nonspecific dipeptidase 0.98 BWI76_RS27250 L-threonine 3-dehydrogenase 0.30 5
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF4108 Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3) 0.98 GFF394 L-threonine 3-dehydrogenase (EC 1.1.1.103) low > 78
Enterobacter asburiae PDN3 0.89 EX28DRAFT_2656 Xaa-His dipeptidase 0.97 EX28DRAFT_3869 L-threonine 3-dehydrogenase (EC 1.1.1.103) low > 76
Enterobacter sp. TBS_079 0.88 MPMX20_00922 Cytosol non-specific dipeptidase 0.97 MPMX20_00116 L-threonine 3-dehydrogenase 0.24 12
Pantoea sp. MT58 0.80 IAI47_15145 beta-Ala-His dipeptidase 0.90 IAI47_00700 L-threonine 3-dehydrogenase low > 76
Dickeya dadantii 3937 0.79 DDA3937_RS16570 beta-Ala-His dipeptidase 0.86 DDA3937_RS20430 L-threonine 3-dehydrogenase low > 74
Serratia liquefaciens MT49 0.78 IAI46_04410 beta-Ala-His dipeptidase 0.95 IAI46_24725 L-threonine 3-dehydrogenase low > 86
Pectobacterium carotovorum WPP14 0.78 HER17_RS04675 beta-Ala-His dipeptidase 0.89 HER17_RS20760 L-threonine 3-dehydrogenase low > 75
Rahnella sp. WP5 0.75 EX31_RS21000 beta-Ala-His dipeptidase 0.91 EX31_RS14385 L-threonine 3-dehydrogenase low > 89
Vibrio cholerae E7946 ATCC 55056 0.65 CSW01_11600 aminoacyl-histidine dipeptidase 0.90 CSW01_18565 L-threonine 3-dehydrogenase low > 62
Shewanella amazonensis SB2B 0.63 Sama_2519 Xaa-His dipeptidase (RefSeq) 0.90 Sama_0097 tdh L-threonine 3-dehydrogenase (RefSeq) low > 62
Shewanella loihica PV-4 0.61 Shew_2852 aminoacyl-histidine dipeptidase (RefSeq) 0.89 Shew_3710 tdh L-threonine 3-dehydrogenase (RefSeq) low > 60
Shewanella sp. ANA-3 0.61 Shewana3_0950 M20C family Xaa-His dipeptidase (RefSeq) 0.89 Shewana3_4105 tdh L-threonine 3-dehydrogenase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.61 SO1115 pepD dipeptidase (EC 3.4.13.-) (from data) 0.89 SO4673 tdh threonine 3-dehydrogenase (NCBI ptt file) low > 76

Not shown: 12 genomes with orthologs for b0237 only; 22 genomes with orthologs for b3616 only