Conservation of cofitness between b3198 and b3199 in Escherichia coli BW25113

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3198 kdsC 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (NCBI) 1.0 b3199 yrbK hypothetical protein (NCBI) 0.44 1
Escherichia coli ECRC99 1.00 KEDOAH_10190 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC 1.00 KEDOAH_10195 lptC LPS export ABC transporter periplasmic protein LptC — —
Escherichia coli ECRC102 1.00 NIAGMN_15720 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC 1.00 NIAGMN_15715 lptC LPS export ABC transporter periplasmic protein LptC — —
Escherichia coli ECRC62 1.00 BNILDI_01775 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC 1.00 BNILDI_01780 lptC LPS export ABC transporter periplasmic protein LptC — —
Escherichia coli ECRC98 1.00 JDDGAC_21585 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.99 JDDGAC_21580 lptC LPS export ABC transporter periplasmic protein LptC — —
Escherichia coli ECOR27 1.00 NOLOHH_09760 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC 1.00 NOLOHH_09755 lptC LPS export ABC transporter periplasmic protein LptC low > 57
Escherichia coli ECRC101 1.00 OKFHMN_17960 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC 1.00 OKFHMN_17955 lptC LPS export ABC transporter periplasmic protein LptC — —
Escherichia coli ECRC101 1.00 MCAODC_08480 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC 1.00 MCAODC_08475 lptC LPS export ABC transporter periplasmic protein LptC — —
Escherichia coli ECOR38 1.00 HEPCGN_16835 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.99 HEPCGN_16830 lptC LPS export ABC transporter periplasmic protein LptC low > 85
Escherichia fergusonii Becca 1.00 EFB2_00625 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC 1.00 EFB2_00624 Lipopolysaccharide export system protein LptC low > 86
Escherichia coli BL21 1.00 ECD_03063 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 0.99 ECD_03064 periplasmic membrane-anchored LPS-binding protein; LPS export protein low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00502 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC 1.00 OHPLBJKB_00501 Lipopolysaccharide export system protein LptC low > 73
Escherichia coli Nissle 1917 1.00 ECOLIN_RS18405 3-deoxy-manno-octulosonate-8-phosphatase KdsC 1.00 ECOLIN_RS18410 LPS export ABC transporter periplasmic protein LptC low > 52
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.97 GFF2942 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) 0.93 GFF2943 Uncharacterized protein YrbK clustered with lipopolysaccharide transporters low > 78
Enterobacter asburiae PDN3 0.92 EX28DRAFT_3252 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 0.88 EX28DRAFT_3253 Uncharacterized protein conserved in bacteria low > 76
Enterobacter sp. TBS_079 0.91 MPMX20_04104 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC 0.87 MPMX20_04105 Lipopolysaccharide export system protein LptC low > 85
Klebsiella michiganensis M5al 0.85 BWI76_RS25245 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 0.85 BWI76_RS25250 LPS export ABC transporter periplasmic protein LptC — —
Pantoea sp. MT58 0.82 IAI47_17165 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.67 IAI47_17170 LPS export ABC transporter periplasmic protein LptC low > 76
Pectobacterium carotovorum WPP14 0.79 HER17_RS20040 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.61 HER17_RS20045 LPS export ABC transporter periplasmic protein LptC low > 75
Erwinia tracheiphila SCR3 0.79 LU632_RS21260 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.64 LU632_RS21265 lptC LPS export ABC transporter periplasmic protein LptC — —
Rahnella sp. WP5 0.78 EX31_RS12420 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.60 EX31_RS12415 LPS export ABC transporter periplasmic protein LptC low > 89
Serratia liquefaciens MT49 0.77 IAI46_22450 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.66 IAI46_22455 LPS export ABC transporter periplasmic protein LptC — —
Dickeya dianthicola 67-19 0.77 HGI48_RS01465 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.56 HGI48_RS01460 LPS export ABC transporter periplasmic protein LptC — —
Dickeya dianthicola ME23 0.77 DZA65_RS01530 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.56 DZA65_RS01525 LPS export ABC transporter periplasmic protein LptC low > 75
Dickeya dadantii 3937 0.76 DDA3937_RS01550 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.57 DDA3937_RS01545 LPS export ABC transporter periplasmic protein LptC — —
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_12795 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.23 CSW01_12800 LPS export ABC transporter periplasmic protein LptC — —
Shewanella loihica PV-4 0.59 Shew_3307 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (RefSeq) 0.18 Shew_3308 hypothetical protein (RefSeq) — —
Shewanella amazonensis SB2B 0.53 Sama_3084 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (RefSeq) 0.20 Sama_3085 hypothetical protein (RefSeq) — —
Shewanella sp. ANA-3 0.52 Shewana3_0676 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (RefSeq) 0.18 Shewana3_0675 hypothetical protein (RefSeq) — —
Shewanella oneidensis MR-1 0.52 SO3957 conserved hypothetical protein (NCBI ptt file) 0.18 SO3958 conserved hypothetical protein (NCBI ptt file) — —
Alteromonas macleodii MIT1002 0.46 MIT1002_00831 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC 0.22 MIT1002_00830 Lipopolysaccharide export system protein LptC — —

Not shown: 52 genomes with orthologs for b3198 only; 0 genomes with orthologs for b3199 only