Conservation of cofitness between b2616 and b3163 in Escherichia coli BW25113

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2616 recN recombination and repair protein (NCBI) 1.0 b3163 nlpI hypothetical protein (NCBI) 0.42 17
Escherichia coli ECOR27 1.00 NOLOHH_12815 recN DNA repair protein RecN 1.00 NOLOHH_09945 nlpI lipoprotein NlpI low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01091 DNA repair protein RecN 1.00 OHPLBJKB_00537 Lipoprotein NlpI low > 73
Escherichia coli ECRC62 1.00 BNILDI_11620 recN DNA repair protein RecN 1.00 BNILDI_01590 nlpI lipoprotein NlpI — —
Escherichia coli BL21 1.00 ECD_02504 recombination and repair protein 1.00 ECD_03030 lipoprotein involved in osmotic sensitivity and filamentation low > 60
Escherichia coli ECRC101 0.99 OKFHMN_21145 recN DNA repair protein RecN 1.00 OKFHMN_18145 nlpI lipoprotein NlpI — —
Escherichia coli ECRC102 0.99 NIAGMN_18915 recN DNA repair protein RecN 1.00 NIAGMN_15905 nlpI lipoprotein NlpI — —
Escherichia coli ECRC101 0.99 MCAODC_11670 recN DNA repair protein RecN 1.00 MCAODC_08665 nlpI lipoprotein NlpI — —
Escherichia coli ECRC99 0.99 KEDOAH_07075 recN DNA repair protein RecN 1.00 KEDOAH_10005 nlpI lipoprotein NlpI — —
Escherichia fergusonii Becca 0.99 EFB2_01277 DNA repair protein RecN 1.00 EFB2_00660 Lipoprotein NlpI low > 86
Escherichia coli ECOR38 0.99 HEPCGN_20265 recN DNA repair protein RecN 1.00 HEPCGN_17020 nlpI lipoprotein NlpI low > 85
Escherichia coli ECRC98 0.99 JDDGAC_24810 recN DNA repair protein RecN 1.00 JDDGAC_21770 nlpI lipoprotein NlpI — —
Escherichia coli Nissle 1917 0.99 ECOLIN_RS14775 DNA repair protein RecN 1.00 ECOLIN_RS18170 lipoprotein NlpI low > 52
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF4162 DNA repair protein RecN 0.97 GFF1503 Lipoprotein nlpI precursor low > 78
Enterobacter asburiae PDN3 0.86 EX28DRAFT_2719 DNA repair protein RecN 0.97 EX28DRAFT_3212 Lipoprotein NlpI, contains TPR repeats low > 76
Enterobacter sp. TBS_079 0.85 MPMX20_03486 DNA repair protein RecN 0.97 MPMX20_04067 Lipoprotein NlpI low > 85
Klebsiella michiganensis M5al 0.84 BWI76_RS21560 DNA repair protein RecN 0.93 BWI76_RS25060 lipoprotein NlpI low > 92
Serratia liquefaciens MT49 0.77 IAI46_19635 DNA repair protein RecN 0.89 IAI46_01960 lipoprotein NlpI 0.43 40
Pantoea sp. MT58 0.77 IAI47_04810 DNA repair protein RecN 0.89 IAI47_17000 lipoprotein NlpI 0.39 19
Rahnella sp. WP5 0.75 EX31_RS21760 DNA repair protein RecN 0.87 EX31_RS08515 lipoprotein NlpI low > 89
Dickeya dadantii 3937 0.73 DDA3937_RS04325 DNA repair protein RecN 0.83 DDA3937_RS03095 lipoprotein NlpI low > 74
Erwinia tracheiphila SCR3 0.73 LU632_RS16985 recN DNA repair protein RecN 0.88 LU632_RS21035 nlpI lipoprotein NlpI — —
Dickeya dianthicola 67-19 0.72 HGI48_RS04320 DNA repair protein RecN 0.83 HGI48_RS03265 lipoprotein NlpI low > 71
Dickeya dianthicola ME23 0.72 DZA65_RS04235 DNA repair protein RecN 0.83 DZA65_RS03260 lipoprotein NlpI low > 75
Pectobacterium carotovorum WPP14 0.72 HER17_RS17420 DNA repair protein RecN 0.85 HER17_RS18185 lipoprotein NlpI low > 75
Shewanella oneidensis MR-1 0.55 SO3462 recN DNA repair protein RecN (NCBI ptt file) 0.39 SO_1210 lipoprotein NlpI (RefSeq) low > 76
Shewanella sp. ANA-3 0.55 Shewana3_1104 recombination and repair protein (RefSeq) 0.40 Shewana3_1036 lipoprotein NlpI (RefSeq) low > 73
Shewanella amazonensis SB2B 0.54 Sama_1026 recombination and repair protein (RefSeq) 0.42 Sama_0967 lipoprotein NlpI (RefSeq) low > 62
Shewanella loihica PV-4 0.53 Shew_1196 recombination and repair protein (RefSeq) 0.42 Shew_2821 lipoprotein NlpI (RefSeq) low > 60
Vibrio cholerae E7946 ATCC 55056 0.53 CSW01_04395 DNA repair protein RecN 0.43 CSW01_03415 lipoprotein NlpI low > 62
Alteromonas macleodii MIT1002 0.43 MIT1002_01443 Recombination protein N 0.37 MIT1002_01919 Lipoprotein NlpI precursor low > 70

Not shown: 69 genomes with orthologs for b2616 only; 0 genomes with orthologs for b3163 only