Conservation of cofitness between b1232 and b1262 in Escherichia coli BW25113

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b1232 purU formyltetrahydrofolate deformylase (NCBI) 1.0 b1262 trpC N-(5-phosphoribosyl)anthranilate isomerase and indole-3-glycerolphosphate synthetase (VIMSS) 0.73 14
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02453 Formyltetrahydrofolate deformylase 1.00 OHPLBJKB_02421 Tryptophan biosynthesis protein TrpCF low > 73
Escherichia coli BL21 1.00 ECD_01208 formyltetrahydrofolate hydrolase 0.99 ECD_01236 indole-3-glycerolphosphate synthetase and N-(5-phosphoribosyl)anthranilate isomerase low > 60
Escherichia coli ECOR27 1.00 NOLOHH_20480 purU formyltetrahydrofolate deformylase 0.99 NOLOHH_20325 trpD bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD low > 57
Escherichia fergusonii Becca 1.00 EFB2_02694 Formyltetrahydrofolate deformylase 0.98 EFB2_02664 Tryptophan biosynthesis protein TrpCF low > 86
Escherichia coli ECOR38 1.00 HEPCGN_25030 purU formyltetrahydrofolate deformylase 0.97 HEPCGN_25525 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF low > 85
Escherichia coli Nissle 1917 1.00 ECOLIN_RS07460 formyltetrahydrofolate deformylase 0.98 ECOLIN_RS07605 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF low > 52
Escherichia coli ECRC99 1.00 KEDOAH_25565 purU formyltetrahydrofolate deformylase 0.98 KEDOAH_26085 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF — —
Escherichia coli ECRC98 1.00 JDDGAC_06005 purU formyltetrahydrofolate deformylase 0.98 JDDGAC_05210 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF — —
Escherichia coli ECRC101 1.00 OKFHMN_28570 purU formyltetrahydrofolate deformylase 0.98 OKFHMN_02665 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF — —
Escherichia coli ECRC102 1.00 NIAGMN_27665 purU formyltetrahydrofolate deformylase 0.98 NIAGMN_26835 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF — —
Escherichia coli ECRC101 1.00 MCAODC_21690 purU formyltetrahydrofolate deformylase 0.98 MCAODC_15600 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF — —
Escherichia coli ECRC62 0.99 BNILDI_18635 purU formyltetrahydrofolate deformylase 0.99 BNILDI_18470 trpD bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.97 GFF2756 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 0.89 GFF2724 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) low > 78
Klebsiella michiganensis M5al 0.96 BWI76_RS17290 formyltetrahydrofolate deformylase 0.84 BWI76_RS11850 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase 0.44 20
Enterobacter sp. TBS_079 0.95 MPMX20_02596 Formyltetrahydrofolate deformylase 0.84 MPMX20_02512 Tryptophan biosynthesis protein TrpCF 0.61 8
Enterobacter asburiae PDN3 0.95 EX28DRAFT_0858 formyltetrahydrofolate deformylase 0.85 EX28DRAFT_0934 indole-3-glycerol phosphate synthase (EC 4.1.1.48) low > 76
Serratia liquefaciens MT49 0.90 IAI46_14265 formyltetrahydrofolate deformylase 0.74 IAI46_14035 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF low > 86
Pectobacterium carotovorum WPP14 0.90 HER17_RS11065 formyltetrahydrofolate deformylase 0.67 HER17_RS10930 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF low > 75
Pantoea sp. MT58 0.90 IAI47_09010 formyltetrahydrofolate deformylase 0.78 IAI47_09175 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF 0.84 18
Dickeya dadantii 3937 0.90 DDA3937_RS10325 formyltetrahydrofolate deformylase 0.69 DDA3937_RS10470 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF low > 74
Erwinia tracheiphila SCR3 0.89 LU632_RS12940 purU formyltetrahydrofolate deformylase 0.73 LU632_RS12765 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF low > 74
Dickeya dianthicola ME23 0.89 DZA65_RS10810 formyltetrahydrofolate deformylase 0.67 DZA65_RS10950 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF 0.62 47
Dickeya dianthicola 67-19 0.89 HGI48_RS10335 formyltetrahydrofolate deformylase 0.68 HGI48_RS10470 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF low > 71
Rahnella sp. WP5 0.89 EX31_RS10115 formyltetrahydrofolate deformylase 0.77 EX31_RS09970 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF 0.85 40
Vibrio cholerae E7946 ATCC 55056 0.73 CSW01_09940 formyltetrahydrofolate deformylase 0.60 CSW01_05935 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase low > 62
Shewanella sp. ANA-3 0.70 Shewana3_2821 purU formyltetrahydrofolate deformylase (RefSeq) 0.40 Shewana3_1517 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.69 Sama_1134 purU formyltetrahydrofolate deformylase (RefSeq) 0.45 Sama_2132 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.68 SO1624 purU formyltetrahydrofolate deformylase (NCBI ptt file) 0.39 SO3022 trpC/F indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.65 Shew_2640 purU formyltetrahydrofolate deformylase (RefSeq) 0.45 Shew_2254 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.36 MIT1002_00404 Formyltetrahydrofolate deformylase 0.46 MIT1002_01427 Tryptophan biosynthesis protein TrpCF low > 70

Not shown: 59 genomes with orthologs for b1232 only; 1 genomes with orthologs for b1262 only