Conservation of cofitness between b1184 and b1181 in Escherichia coli BW25113

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b1184 umuC DNA polymerase V subunit UmuC (NCBI) 1.0 b1181 ycgN conserved protein (RefSeq) 0.30 17
Escherichia coli BL21 1.00 ECD_01159 translesion error-prone DNA polymerase V subunit; DNA polymerase activity 0.99 ECD_01156 UPF0153 family cysteine cluster protein — —
Escherichia coli ECOR27 1.00 NOLOHH_20750 umuC DNA polymerase V catalytic protein 0.97 NOLOHH_20775 ycgN YcgN family cysteine cluster protein — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02505 Protein UmuC 0.97 OHPLBJKB_02510 hypothetical protein low > 73
Escherichia coli ECRC62 0.99 BNILDI_18915 umuC DNA polymerase V catalytic protein 1.00 BNILDI_18935 ycgN YcgN family cysteine cluster protein — —
Escherichia coli ECOR38 0.99 HEPCGN_24725 umuC DNA polymerase V catalytic protein 0.97 HEPCGN_24695 ycgN YcgN family cysteine cluster protein low > 85
Escherichia coli ECRC98 0.99 JDDGAC_06245 umuC DNA polymerase V catalytic protein 0.97 JDDGAC_06265 ycgN YcgN family cysteine cluster protein — —
Escherichia coli ECRC101 0.99 OKFHMN_28265 umuC DNA polymerase V catalytic protein 0.97 OKFHMN_28245 ycgN YcgN family cysteine cluster protein — —
Escherichia coli ECRC102 0.99 NIAGMN_27955 umuC DNA polymerase V catalytic protein 0.97 NIAGMN_27975 ycgN YcgN family cysteine cluster protein — —
Escherichia coli ECRC99 0.99 KEDOAH_25280 umuC DNA polymerase V catalytic protein 0.97 KEDOAH_25260 ycgN YcgN family cysteine cluster protein — —
Escherichia coli ECRC101 0.99 MCAODC_21905 umuC DNA polymerase V catalytic protein 0.97 MCAODC_21925 ycgN YcgN family cysteine cluster protein — —
Escherichia fergusonii Becca 0.98 EFB2_02748 Protein UmuC 0.96 EFB2_02750 hypothetical protein low > 86
Escherichia coli Nissle 1917 0.98 ECOLIN_RS07160 DNA polymerase V catalytic protein 0.96 ECOLIN_RS07145 YcgN family cysteine cluster protein — —
Klebsiella michiganensis M5al 0.87 BWI76_RS12385 DNA polymerase V subunit UmuC 0.90 BWI76_RS17765 hypothetical protein low > 92
Enterobacter asburiae PDN3 0.87 EX28DRAFT_1261 Nucleotidyltransferase/DNA polymerase involved in DNA repair 0.87 EX28DRAFT_0761 Uncharacterized conserved protein low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.85 GFF3989 Error-prone, lesion bypass DNA polymerase V (UmuC) 0.93 GFF2813 YcgN (Fragment) low > 78
Rahnella sp. WP5 0.68 EX31_RS00805 translesion error-prone DNA polymerase V subunit UmuC 0.73 EX31_RS10560 YcgN family cysteine cluster protein low > 89
Enterobacter sp. TBS_079 0.66 MPMX20_02045 Protein UmuC 0.88 MPMX20_02704 hypothetical protein low > 85
Serratia liquefaciens MT49 0.65 IAI46_15980 translesion error-prone DNA polymerase V subunit UmuC 0.82 IAI46_14490 YcgN family cysteine cluster protein low > 86
Pantoea sp. MT58 0.64 IAI47_10585 translesion error-prone DNA polymerase V subunit UmuC 0.78 IAI47_08870 YcgN family cysteine cluster protein low > 76
Erwinia tracheiphila SCR3 0.56 LU632_RS01730 umuC translesion error-prone DNA polymerase V subunit UmuC 0.79 LU632_RS13100 YcgN family cysteine cluster protein low > 74
Pseudomonas syringae pv. syringae B728a 0.46 Psyr_1425 DNA-directed DNA polymerase 0.49 Psyr_1567 Uncharacterized conserved protein UCP006173 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.46 Psyr_1425 DNA-directed DNA polymerase 0.49 Psyr_1567 Uncharacterized conserved protein UCP006173 low > 86
Pseudomonas sp. RS175 0.44 PFR28_01192 Protein UmuC 0.50 PFR28_00716 hypothetical protein low > 88
Pseudomonas sp. S08-1 0.39 OH686_22885 Error-prone, lesion bypass DNA polymerase V (UmuC) 0.48 OH686_05300 UPF0260 protein YcgN low > 80
Kangiella aquimarina DSM 16071 0.37 B158DRAFT_1835 Nucleotidyltransferase/DNA polymerase involved in DNA repair 0.39 B158DRAFT_1576 Uncharacterized conserved protein low > 40
Shewanella sp. ANA-3 0.36 Shewana3_1832 DNA-repair protein (RefSeq) 0.49 Shewana3_2379 hypothetical protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.36 SOA0012 umuC umuC protein (NCBI ptt file) 0.51 SO2573 conserved hypothetical protein (NCBI ptt file) low > 76
Magnetospirillum magneticum AMB-1 0.36 AMB_RS10435 DUF4113 domain-containing protein 0.48 AMB_RS02675 YcgN family cysteine cluster protein low > 64
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_5450 Error-prone, lesion bypass DNA polymerase V (UmuC) 0.49 Pf1N1B4_3349 YcgN (Fragment) low > 87
Bosea sp. OAE506 0.35 ABIE41_RS06700 Y-family DNA polymerase 0.43 ABIE41_RS22395 YcgN family cysteine cluster protein low > 77
Sphingomonas koreensis DSMZ 15582 0.35 Ga0059261_3541 Nucleotidyltransferase/DNA polymerase involved in DNA repair 0.42 Ga0059261_2183 Uncharacterized conserved protein low > 68

Not shown: 6 genomes with orthologs for b1184 only; 29 genomes with orthologs for b1181 only