Conservation of cofitness between b2523 and b0779 in Escherichia coli BW25113

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2523 pepB putative peptidase (VIMSS) 1.0 b0779 uvrB excinuclease ABC subunit B (NCBI) 0.22 20
Escherichia coli BL21 1.00 ECD_02415 aminopeptidase B 1.00 ECD_00746 exision nuclease of nucleotide excision repair, DNA damage recognition component low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01186 Peptidase B 1.00 OHPLBJKB_02934 UvrABC system protein B low > 73
Escherichia coli ECOR27 1.00 NOLOHH_13325 pepB aminopeptidase PepB 1.00 NOLOHH_22750 uvrB excinuclease ABC subunit UvrB low > 57
Escherichia coli ECRC62 1.00 BNILDI_12125 pepB aminopeptidase PepB 1.00 BNILDI_21020 uvrB excinuclease ABC subunit UvrB — —
Escherichia coli ECRC101 0.99 OKFHMN_21655 pepB aminopeptidase PepB 1.00 OKFHMN_06380 uvrB excinuclease ABC subunit UvrB — —
Escherichia coli ECRC98 0.99 JDDGAC_25330 pepB aminopeptidase PepB 1.00 JDDGAC_10015 uvrB excinuclease ABC subunit UvrB — —
Escherichia coli ECRC102 0.99 NIAGMN_19425 pepB aminopeptidase PepB 1.00 NIAGMN_04425 uvrB excinuclease ABC subunit UvrB — —
Escherichia coli ECRC101 0.99 MCAODC_12185 pepB aminopeptidase PepB 1.00 MCAODC_25595 uvrB excinuclease ABC subunit UvrB — —
Escherichia coli ECRC99 0.99 KEDOAH_06565 pepB aminopeptidase PepB 1.00 KEDOAH_21530 uvrB excinuclease ABC subunit UvrB — —
Escherichia coli ECOR38 0.99 HEPCGN_20795 pepB aminopeptidase PepB 1.00 HEPCGN_01660 uvrB excinuclease ABC subunit UvrB low > 85
Escherichia fergusonii Becca 0.99 EFB2_01367 Peptidase B 1.00 EFB2_03326 UvrABC system protein B low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS14330 aminopeptidase PepB 1.00 ECOLIN_RS04150 excinuclease ABC subunit UvrB low > 52
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF2428 Peptidase B (EC 3.4.11.23) 0.93 GFF675 Excinuclease ABC subunit B low > 78
Klebsiella michiganensis M5al 0.91 BWI76_RS21125 aminopeptidase PepB 0.93 BWI76_RS08785 excinuclease ABC subunit B low > 92
Enterobacter sp. TBS_079 0.87 MPMX20_03404 Peptidase B 0.94 MPMX20_01408 UvrABC system protein B low > 85
Enterobacter asburiae PDN3 0.87 EX28DRAFT_0117 Leucyl aminopeptidase 0.94 EX28DRAFT_2211 Excinuclease ABC subunit B low > 76
Serratia liquefaciens MT49 0.78 IAI46_19320 aminopeptidase PepB 0.88 IAI46_06550 excinuclease ABC subunit B low > 86
Pantoea sp. MT58 0.77 IAI47_05010 aminopeptidase PepB 0.89 IAI47_13505 excinuclease ABC subunit B low > 76
Dickeya dianthicola 67-19 0.76 HGI48_RS15610 aminopeptidase PepB 0.86 HGI48_RS08695 excinuclease ABC subunit B low > 71
Dickeya dadantii 3937 0.76 DDA3937_RS15510 aminopeptidase PepB 0.87 DDA3937_RS08530 excinuclease ABC subunit B low > 74
Dickeya dianthicola ME23 0.76 DZA65_RS16685 aminopeptidase PepB 0.87 DZA65_RS08990 excinuclease ABC subunit B low > 75
Erwinia tracheiphila SCR3 0.73 LU632_RS17865 pepB aminopeptidase PepB 0.90 LU632_RS09160 uvrB excinuclease ABC subunit B low > 74
Rahnella sp. WP5 0.72 EX31_RS20540 aminopeptidase PepB 0.87 EX31_RS23720 excinuclease ABC subunit B low > 89
Pectobacterium carotovorum WPP14 0.71 HER17_RS06050 aminopeptidase PepB 0.88 HER17_RS13420 excinuclease ABC subunit B low > 75
Vibrio cholerae E7946 ATCC 55056 0.62 CSW01_03920 peptidase B 0.78 CSW01_05185 excinuclease ABC subunit UvrB low > 62
Kangiella aquimarina DSM 16071 0.47 B158DRAFT_0048 Leucyl aminopeptidase 0.70 B158DRAFT_2341 Excinuclease ABC subunit B low > 40
Alteromonas macleodii MIT1002 0.45 MIT1002_03688 Peptidase B 0.74 MIT1002_01261 Excinuclease ABC subunit B low > 70
Shewanella amazonensis SB2B 0.43 Sama_0782 aminopeptidase B (RefSeq) 0.74 Sama_1828 excinuclease ABC subunit B (RefSeq) low > 62
Shewanella sp. ANA-3 0.42 Shewana3_3402 aminopeptidase B (RefSeq) 0.74 Shewana3_2166 excinuclease ABC subunit B (RefSeq) low > 73
Shewanella loihica PV-4 0.42 Shew_3127 aminopeptidase B (RefSeq) 0.74 Shew_2064 excinuclease ABC subunit B (RefSeq) low > 60
Shewanella oneidensis MR-1 0.42 SO0876 pepB peptidase B (NCBI ptt file) 0.75 SO2506 uvrB excinuclease ABC, B subunit (NCBI ptt file) low > 76

Not shown: 0 genomes with orthologs for b2523 only; 67 genomes with orthologs for b0779 only