Homologs of Echvi_2139 from Echinicola vietnamensis KMM 6221, DSM 17526

RNA polymerase sigma-70 factor, Bacteroides expansion family 1
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2139 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 100 100
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3981 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 45 86
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS02700 RNA polymerase sigma-70 factor insig. 32 90
  Bacteroides thetaiotaomicron VPI-5482 BT0188 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 33 82
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3924 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 strong 32 83
o Bacteroides ovatus ATCC 8483 BACOVA_05573 RNA polymerase sigma-70 factor insig. 31 84
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS09605 RNA polymerase sigma-70 factor insig. 33 81
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07365 RNA polymerase sigma factor insig. 30 89
  Bacteroides ovatus ATCC 8483 BACOVA_01251 RNA polymerase sigma-70 factor sig. 33 81
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2751 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 31 85
  Bacteroides ovatus ATCC 8483 BACOVA_03129 Sigma-70 region 2 insig. 29 83
  Bacteroides thetaiotaomicron VPI-5482 BT3010 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 31 81
  Bacteroides thetaiotaomicron VPI-5482 BT4722 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 29 88
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07135 RNA polymerase sigma factor insig. 29 83
  Phocaeicola dorei CL03T12C01 ABI39_RS08620 RNA polymerase sigma-70 factor insig. 30 82
  Bacteroides stercoris CC31F HMPREF1181_RS04900 RNA polymerase sigma-70 factor insig. 31 86
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS00160 hypothetical protein insig. 31 97
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2168 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 29 93
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2852 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 strong 28 82
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3527 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 31 85
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05575 RNA polymerase sigma-70 factor insig. 26 85
  Bacteroides ovatus ATCC 8483 BACOVA_02944 RNA polymerase sigma-70 factor insig. 28 86
  Phocaeicola dorei CL03T12C01 ABI39_RS08655 RNA polymerase sigma-70 factor insig. 34 84
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS15190 RNA polymerase sigma factor insig. 33 80
  Bacteroides ovatus ATCC 8483 BACOVA_00098 RNA polymerase sigma-70 factor insig. 27 92
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05665 RNA polymerase sigma-70 factor insig. 27 88
  Phocaeicola dorei CL03T12C01 ABI39_RS18115 RNA polymerase sigma-70 factor insig. 31 86
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3125 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 29 85
  Bacteroides thetaiotaomicron VPI-5482 BT4250 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 27 86
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4534 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 30 81
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS13420 RNA polymerase sigma-70 factor insig. 33 83
  Bacteroides ovatus ATCC 8483 BACOVA_05174 RNA polymerase sigma-70 factor insig. 31 84
  Bacteroides thetaiotaomicron VPI-5482 BT1617 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 26 82
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS12860 RNA polymerase sigma-70 factor cofit 30 87
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS06675 hypothetical protein insig. 29 86
  Bacteroides ovatus ATCC 8483 BACOVA_02037 RNA polymerase sigma-70 factor insig. 27 88
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS21220 hypothetical protein insig. 32 86
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS00590 RNA polymerase sigma-70 factor insig. 26 81
  Bacteroides stercoris CC31F HMPREF1181_RS01060 RNA polymerase sigma-70 factor insig. 24 86
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01538 RNA polymerase sigma-70 factor, ECF subfamily insig. 24 93
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05690 RNA polymerase sigma-70 factor insig. 27 80
  Bacteroides ovatus ATCC 8483 BACOVA_05617 RNA polymerase sigma-70 factor sig. 29 89
  Bacteroides thetaiotaomicron VPI-5482 BT4355 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 33 82
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS12920 RNA polymerase sigma-70 factor cofit 29 81
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS17775 hypothetical protein sig. 28 81
  Bacteroides ovatus ATCC 8483 BACOVA_00771 RNA polymerase sigma-70 factor insig. 26 87
  Bacteroides ovatus ATCC 8483 BACOVA_00923 RNA polymerase sigma-70 factor insig. 26 87
  Paraburkholderia graminis OAS925 ABIE53_005146 RNA polymerase sigma factor (sigma-70 family) sig. 23 83
  Phocaeicola dorei CL03T12C01 ABI39_RS06310 RNA polymerase sigma-70 factor cofit 27 87
  Bacteroides ovatus ATCC 8483 BACOVA_02117 RNA polymerase sigma-70 factor insig. 29 75
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4327 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 28 79
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_11515 RNA polymerase sigma-70 factor insig. 27 84
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12470 hypothetical protein insig. 29 83
  Bacteroides ovatus ATCC 8483 BACOVA_00284 RNA polymerase sigma-70 factor insig. 28 84
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS10785 RNA polymerase sigma-70 factor sig. 27 87
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS09110 RNA polymerase sigma-70 factor sig. 29 84
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12140 hypothetical protein insig. 30 90
  Phocaeicola dorei CL03T12C01 ABI39_RS10155 RNA polymerase sigma-70 factor insig. 26 85
  Bacteroides ovatus ATCC 8483 BACOVA_03283 RNA polymerase sigma-70 factor insig. 26 82
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS03570 RNA polymerase sigma-70 factor insig. 28 88
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS13395 sigma-70 family RNA polymerase sigma factor cofit 27 82
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12095 RNA polymerase subunit sigma-70 insig. 27 85
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS02575 hypothetical protein insig. 31 77
  Bacteroides ovatus ATCC 8483 BACOVA_00842 RNA polymerase sigma-70 factor insig. 30 76
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS00265 RNA polymerase sigma-70 factor insig. 29 84
  Phocaeicola dorei CL03T12C01 ABI39_RS03415 RNA polymerase sigma-70 factor insig. 28 84
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS21040 RNA polymerase sigma-70 factor insig. 27 90
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4566 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 26 87
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS17460 RNA polymerase sigma-70 factor insig. 24 88
  Cellulophaga baltica 18 M666_RS04155 sigma-70 family RNA polymerase sigma factor insig. 24 86
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS11895 hypothetical protein insig. 28 83
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3656 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 28 80
  Bacteroides ovatus ATCC 8483 BACOVA_01909 Sigma-70 region 2 sig. 26 74
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12435 hypothetical protein insig. 29 83
  Bacteroides thetaiotaomicron VPI-5482 BT3396 RNA polymerase ECF-type sigma factor (NCBI ptt file) strong 26 74
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS11705 hypothetical protein insig. 28 90
  Bacteroides ovatus ATCC 8483 BACOVA_05184 RNA polymerase sigma-70 factor insig. 25 82
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS24305 hypothetical protein sig. 26 75
  Phocaeicola dorei CL03T12C01 ABI39_RS03560 RNA polymerase sigma factor insig. 25 77
  Bacteroides ovatus ATCC 8483 BACOVA_04866 RNA polymerase sigma-70 factor insig. 27 79
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS09175 RNA polymerase sigma factor sig. 26 77
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS12340 RNA polymerase sigma-70 factor cofit 30 77
  Variovorax sp. OAS795 ABID97_RS28845 RNA polymerase sigma factor insig. 24 88
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS02650 RNA polymerase sigma factor insig. 23 97
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS01700 RNA polymerase sigma factor insig. 31 80
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS20645 RNA polymerase subunit sigma-70 insig. 26 90
  Azospirillum brasilense Sp245 AZOBR_RS28490 hypothetical protein sig. 25 87
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0865 RNA polymerase sigma factor, sigma-70 family insig. 30 90
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS15190 RNA polymerase sigma-70 factor insig. 27 77
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS02095 RNA polymerase sigma factor insig. 26 85
  Azospirillum sp. SherDot2 MPMX19_05214 ECF RNA polymerase sigma factor SigE insig. 24 87
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS13360 RNA polymerase sigma-70 factor insig. 28 86
  Bacteroides stercoris CC31F HMPREF1181_RS10020 RNA polymerase sigma-70 factor cofit 26 87
  Pseudomonas stutzeri RCH2 Psest_3456 RNA polymerase sigma factor, sigma-70 family insig. 25 79
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2584 RNA polymerase sigma factor, sigma-70 family insig. 23 88
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2047 RNA polymerase sigma factor, sigma-70 family strong 26 79
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS10380 RNA polymerase subunit sigma-70 insig. 31 87
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS14155 RNA polymerase sigma-70 factor insig. 28 77
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS04750 RNA polymerase sigma-70 factor insig. 26 82
  Herbaspirillum seropedicae SmR1 HSERO_RS09625 RNA polymerase sigma factor RpoE no data 24 84