Conservation of cofitness between Xcc-8004.4982.1 and Xcc-8004.3387.1 in Xanthomonas campestris pv. campestris strain 8004

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.4982.1 Protein yjbJ 1.0 Xcc-8004.3387.1 transcriptional regulator 0.37 5
Lysobacter sp. OAE881 0.81 ABIE51_RS04000 CsbD family protein 0.52 ABIE51_RS02340 LacI family DNA-binding transcriptional regulator low > 62
Rhodanobacter sp. FW510-T8 0.60 OKGIIK_14015 yjbJ CsbD family protein 0.51 OKGIIK_01695 Transcriptional regulator low > 52
Pantoea sp. MT58 0.55 IAI47_21375 CsbD family protein 0.21 IAI47_10350 Mal regulon transcriptional regulator MalI low > 76
Enterobacter sp. TBS_079 0.49 MPMX20_00261 hypothetical protein 0.28 MPMX20_00737 Maltose regulon regulatory protein MalI low > 85
Dinoroseobacter shibae DFL-12 0.49 Dshi_4184 CsbD family protein (RefSeq) 0.15 Dshi_4217 transcriptional regulator, LacI family (RefSeq) — —
Serratia liquefaciens MT49 0.48 IAI46_22995 CsbD family protein 0.29 IAI46_22025 LacI family DNA-binding transcriptional regulator low > 86
Escherichia coli Nissle 1917 0.47 ECOLIN_RS23345 CsbD family protein 0.29 ECOLIN_RS23390 LacI family DNA-binding transcriptional regulator low > 55
Escherichia coli ECOR38 0.47 HEPCGN_11575 yjbJ UPF0337 protein YjbJ 0.17 HEPCGN_05975 malI mal regulon transcriptional regulator MalI low > 87
Enterobacter asburiae PDN3 0.47 EX28DRAFT_4267 Uncharacterized protein conserved in bacteria 0.18 EX28DRAFT_2452 transcriptional regulator, LacI family low > 76
Escherichia fergusonii Becca 0.47 EFB2_04558 hypothetical protein 0.29 EFB2_04549 HTH-type transcriptional repressor CytR low > 86
Klebsiella michiganensis M5al 0.47 BWI76_RS01885 CsbD family protein 0.18 BWI76_RS16290 Mal regulon transcriptional regulator MalI low > 92
Escherichia coli ECRC62 0.45 BNILDI_06310 yjbJ UPF0337 protein YjbJ 0.17 BNILDI_16900 malI mal regulon transcriptional regulator MalI low > 75
Escherichia coli BW25113 0.45 b4045 yjbJ predicted stress response protein (NCBI) 0.17 b1620 malI DNA-binding transcriptional repressor (NCBI) low > 76
Escherichia coli ECOR27 0.45 NOLOHH_05210 yjbJ UPF0337 protein YjbJ 0.17 NOLOHH_18110 malI mal regulon transcriptional regulator MalI low > 75
Escherichia coli ECRC102 0.45 NIAGMN_10805 yjbJ UPF0337 protein YjbJ 0.17 NIAGMN_00480 malI mal regulon transcriptional regulator MalI — —
Escherichia coli BL21 0.45 ECD_03917 stress-induced protein, UPF0337 family 0.17 ECD_01589 transcriptional repressor of Mal regulon low > 61
Escherichia coli ECRC99 0.45 KEDOAH_15105 yjbJ UPF0337 protein YjbJ 0.17 KEDOAH_00510 malI mal regulon transcriptional regulator MalI — —
Escherichia coli ECRC101 0.45 MCAODC_03555 yjbJ UPF0337 protein YjbJ 0.17 MCAODC_17815 malI mal regulon transcriptional regulator MalI low > 87
Escherichia coli ECRC100 0.45 OKFHMN_13055 yjbJ UPF0337 protein YjbJ 0.17 OKFHMN_27595 malI mal regulon transcriptional regulator MalI — —
Escherichia coli ECRC98 0.45 JDDGAC_16680 yjbJ UPF0337 protein YjbJ 0.17 JDDGAC_02185 malI mal regulon transcriptional regulator MalI low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.45 OHPLBJKB_03998 hypothetical protein 0.17 OHPLBJKB_02106 Maltose regulon regulatory protein MalI low > 73
Rhizobium sp. OAE497 0.45 ABIE40_RS26785 CsbD family protein 0.25 ABIE40_RS16645 LacI family DNA-binding transcriptional regulator low > 107
Agrobacterium fabrum C58 0.43 Atu4724 hypothetical protein 0.24 Atu4505 LacI family transcriptional regulator low > 89
Burkholderia phytofirmans PsJN 0.41 BPHYT_RS14335 hypothetical protein 0.19 BPHYT_RS00410 LacI family transcription regulator — —
Sinorhizobium meliloti 1021 0.40 SM_b21330 hypothetical protein 0.34 SMc04401 transcriptional regulator low > 103

Not shown: 17 genomes with orthologs for Xcc-8004.4982.1 only; 4 genomes with orthologs for Xcc-8004.3387.1 only