Conservation of cofitness between RR42_RS02080 and RR42_RS21255 in Cupriavidus basilensis FW507-4G11

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS02080 ribosome hibernation promoting factor 1.0 RR42_RS21255 LysR family transcriptional regulator 0.59 6
Ralstonia sp. UNC404CL21Col 0.85 ABZR87_RS07055 ribosome-associated translation inhibitor RaiA 0.41 ABZR87_RS12870 LysR family transcriptional regulator low > 80
Paraburkholderia sabiae LMG 24235 0.71 QEN71_RS01750 ribosome-associated translation inhibitor RaiA 0.34 QEN71_RS12500 LysR family transcriptional regulator low > 153
Paraburkholderia bryophila 376MFSha3.1 0.70 H281DRAFT_01928 sigma 54 modulation protein /SSU ribosomal protein S30P 0.32 H281DRAFT_03683 transcriptional regulator, LysR family low > 103
Burkholderia phytofirmans PsJN 0.70 BPHYT_RS02900 ribosome hibernation promoting factor 0.45 BPHYT_RS07095 LysR family transcriptional regulator low > 109
Paraburkholderia graminis OAS925 0.69 ABIE53_000717 putative sigma-54 modulation protein 0.32 ABIE53_004575 DNA-binding transcriptional LysR family regulator low > 113
Variovorax sp. SCN45 0.62 GFF7293 Ribosome hibernation promoting factor Hpf 0.60 GFF3566 Transcriptional regulator, LysR family low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.62 GFF2612 Ribosome hibernation protein YhbH 0.59 GFF5758 Transcriptional regulators, LysR family low > 90
Castellaniella sp019104865 MT123 0.47 ABCV34_RS14345 ribosome-associated translation inhibitor RaiA 0.25 ABCV34_RS01520 LysR family transcriptional regulator low > 48
Rahnella sp. WP5 0.39 EX31_RS12395 ribosome hibernation promoting factor 0.33 EX31_RS16990 LysR family transcriptional regulator low > 89
Pantoea sp. MT58 0.35 IAI47_17190 ribosome hibernation promoting factor 0.33 IAI47_09745 LysR family transcriptional regulator 0.58 54
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.34 GFF2947 Ribosome hibernation protein YhbH 0.35 GFF1786 LysR family transcriptional regulator YnfL low > 78
Escherichia coli ECRC102 0.33 NIAGMN_15695 Ribosome hibernation promoting factor 0.35 NIAGMN_00340 ynfL Uncharacterized HTH-type transcriptional regulator YnfL — —
Escherichia coli ECRC101 0.33 MCAODC_08455 Ribosome hibernation promoting factor 0.35 MCAODC_17675 ynfL Uncharacterized HTH-type transcriptional regulator YnfL low > 87
Escherichia coli ECRC99 0.33 KEDOAH_10215 Ribosome hibernation promoting factor 0.35 KEDOAH_00370 ynfL Uncharacterized HTH-type transcriptional regulator YnfL — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.33 OHPLBJKB_00497 Ribosome hibernation promoting factor 0.35 OHPLBJKB_02131 Hca operon transcriptional activator HcaR low > 73
Escherichia coli BW25113 0.33 b3203 yhbH predicted ribosome-associated, sigma 54 modulation protein (NCBI) 0.35 b1595 ynfL predicted DNA-binding transcriptional regulator (NCBI) low > 76
Escherichia coli ECRC98 0.33 JDDGAC_21560 Ribosome hibernation promoting factor 0.35 JDDGAC_02325 ynfL Uncharacterized HTH-type transcriptional regulator YnfL low > 86
Escherichia coli ECOR27 0.33 NOLOHH_09735 Ribosome hibernation promoting factor 0.35 NOLOHH_18240 ynfL Uncharacterized HTH-type transcriptional regulator YnfL low > 75
Escherichia coli BL21 0.33 ECD_03068 ribosome hibernation promoting factor HPF; stabilizes 100S dimers 0.35 ECD_01564 LysR family putative transcriptional regulator — —
Escherichia coli ECRC62 0.33 BNILDI_01800 Ribosome hibernation promoting factor 0.35 BNILDI_17030 ynfL Uncharacterized HTH-type transcriptional regulator YnfL low > 75
Escherichia coli ECOR38 0.33 HEPCGN_16810 Ribosome hibernation promoting factor 0.35 HEPCGN_06110 ynfL Uncharacterized HTH-type transcriptional regulator YnfL low > 87
Escherichia coli ECRC100 0.33 OKFHMN_17935 Ribosome hibernation promoting factor 0.35 OKFHMN_27735 ynfL Uncharacterized HTH-type transcriptional regulator YnfL low > 80
Enterobacter sp. TBS_079 0.31 MPMX20_04109 Ribosome hibernation promoting factor 0.35 MPMX20_02062 Hca operon transcriptional activator HcaR low > 85
Enterobacter asburiae PDN3 0.30 EX28DRAFT_3257 ribosomal subunit interface protein 0.34 EX28DRAFT_1494 Transcriptional regulator low > 76

Not shown: 46 genomes with orthologs for RR42_RS02080 only; 6 genomes with orthologs for RR42_RS21255 only