Conservation of cofitness between Psyr_0133 and Psyr_3193 in Pseudomonas syringae pv. syringae B728a

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_0133 transcriptional regulator, AsnC family 1.0 Psyr_3193 Transcription factor jumonji, jmjC 0.35 13
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_0133 transcriptional regulator, AsnC family 1.00 Psyr_3193 Transcription factor jumonji, jmjC low > 86
Cupriavidus basilensis FW507-4G11 0.64 RR42_RS02555 transcriptional regulator 0.29 RR42_RS06270 cupin low > 128
Paraburkholderia sabiae LMG 24235 0.57 QEN71_RS23210 Lrp/AsnC family transcriptional regulator 0.32 QEN71_RS06070 cupin domain-containing protein low > 153
Paraburkholderia bryophila 376MFSha3.1 0.56 H281DRAFT_05082 transcriptional regulator, AsnC family 0.32 H281DRAFT_00534 50S ribosomal protein L16 3-hydroxylase low > 103
Pseudomonas putida KT2440 0.55 PP_4595 putative LRP-like transcriptional regulator 0.84 PP_4017 conserved protein of unknown function — —
Pseudomonas sp. BP01 0.53 JOY50_RS01575 Lrp/AsnC family transcriptional regulator 0.84 JOY50_RS06600 cupin domain-containing protein low > 84
Enterobacter sp. TBS_079 0.52 MPMX20_01039 DNA-binding transcriptional activator DecR 0.31 MPMX20_01809 50S ribosomal protein L16 3-hydroxylase low > 85
Dickeya dadantii 3937 0.52 DDA3937_RS05680 Lrp/AsnC family transcriptional regulator 0.30 DDA3937_RS11510 cupin domain-containing protein low > 74
Pectobacterium carotovorum WPP14 0.52 HER17_RS15805 Lrp/AsnC family transcriptional regulator 0.29 HER17_RS19385 cupin domain-containing protein low > 75
Enterobacter asburiae PDN3 0.51 EX28DRAFT_2522 Transcriptional regulators 0.31 EX28DRAFT_1802 Uncharacterized conserved protein low > 76
Dickeya dianthicola ME23 0.51 DZA65_RS06050 Lrp/AsnC family transcriptional regulator 0.30 DZA65_RS15735 cupin domain-containing protein low > 75
Dickeya dianthicola 67-19 0.51 HGI48_RS05725 Lrp/AsnC ligand binding domain-containing protein 0.30 HGI48_RS14985 cupin domain-containing protein low > 71
Escherichia coli ECOR38 0.50 HEPCGN_06895 decR DNA-binding transcriptional regulator DecR 0.31 HEPCGN_24085 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase low > 88
Escherichia coli ECRC98 0.50 JDDGAC_11935 decR DNA-binding transcriptional regulator DecR 0.31 JDDGAC_06730 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.50 GFF4364 Putative HTH-type transcriptional regulator ybaO 0.30 GFF3413 FIG002776: hypothetical protein low > 78
Escherichia coli ECRC102 0.50 NIAGMN_06335 decR DNA-binding transcriptional regulator DecR 0.31 NIAGMN_24760 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase low > 80
Alteromonas macleodii MIT1002 0.50 MIT1002_03625 Leucine-responsive regulatory protein 0.27 MIT1002_01824 50S ribosomal protein L16 arginine hydroxylase low > 70
Escherichia coli ECRC99 0.50 KEDOAH_19685 decR DNA-binding transcriptional regulator DecR 0.31 KEDOAH_24720 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase — —
Escherichia coli ECRC62 0.50 BNILDI_22630 decR DNA-binding transcriptional regulator DecR 0.31 BNILDI_19090 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase low > 75
Escherichia coli BL21 0.50 ECD_00399 putative DNA-binding transcriptional regulator 0.31 ECD_01126 50S ribosomal protein L16 arginine hydroxylase; 2-oxoglutarate oxygenase low > 61
Escherichia coli ECRC100 0.50 OKFHMN_08280 decR DNA-binding transcriptional regulator DecR 0.31 OKFHMN_00635 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase low > 79
Escherichia coli Nissle 1917 0.50 ECOLIN_RS02680 DNA-binding transcriptional regulator DecR 0.31 ECOLIN_RS06500 [50S ribosomal protein L16]-arginine 3-hydroxylase — —
Escherichia coli ECRC101 0.50 MCAODC_27505 decR DNA-binding transcriptional regulator DecR 0.31 MCAODC_22450 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase low > 87
Escherichia coli BW25113 0.50 b0447 ybaO putative LRP-like transcriptional regulator (VIMSS) 0.31 b1128 ycfD orf, hypothetical protein (VIMSS) low > 76
Escherichia fergusonii Becca 0.50 EFB2_03610 DNA-binding transcriptional activator DecR 0.31 EFB2_02847 50S ribosomal protein L16 3-hydroxylase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.50 OHPLBJKB_03226 DNA-binding transcriptional activator DecR 0.31 OHPLBJKB_02540 50S ribosomal protein L16 3-hydroxylase low > 74
Escherichia coli ECOR27 0.50 NOLOHH_01215 decR DNA-binding transcriptional regulator DecR 0.31 NOLOHH_20925 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase low > 76
Klebsiella michiganensis M5al 0.49 BWI76_RS06580 transcriptional regulator 0.31 BWI76_RS11270 50S ribosomal protein L16 arginine hydroxylase — —
Erwinia amylovora T8 0.49 OLJFJH_17925 transcriptional regulator 0.30 OLJFJH_15280 50S ribosomal protein L16 arginine hydroxylase low > 58
Pantoea agglomerans CFBP13505 P0401 0.49 PagCFBP13505_RS10595 Lrp/AsnC family transcriptional regulator 0.29 PagCFBP13505_RS19445 cupin domain-containing protein low > 74
Pseudomonas fluorescens FW300-N2E3 0.49 AO353_24405 ArsR family transcriptional regulator 0.93 AO353_27720 cupin low > 101
Klebsiella pneumoniae MKP103 0.48 KDGMDA_14665 transcriptional regulator 0.30 KDGMDA_18870 50S ribosomal protein L16 arginine hydroxylase 0.26 39
Serratia liquefaciens MT49 0.48 IAI46_05065 Lrp/AsnC family transcriptional regulator 0.30 IAI46_10385 cupin domain-containing protein low > 87
Rahnella sp. WP5 0.48 EX31_RS22300 Lrp/AsnC family transcriptional regulator 0.29 EX31_RS24550 cupin domain-containing protein low > 89

Not shown: 19 genomes with orthologs for Psyr_0133 only; 38 genomes with orthologs for Psyr_3193 only