Conservation of cofitness between Psyr_5005 and Psyr_0880 in Pseudomonas syringae pv. syringae B728a

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_5005 protein of unknown function DUF945 1.0 Psyr_0880 MltA:3D 0.35 20
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_5005 protein of unknown function DUF945 1.00 Psyr_0880 MltA:3D low > 86
Pseudomonas fluorescens FW300-N2E3 0.39 AO353_11370 hypothetical protein 0.73 AO353_07985 transglycosylase low > 101
Pseudomonas fluorescens GW456-L13 0.37 PfGW456L13_502 GTP-binding protein 0.71 PfGW456L13_1057 Membrane-bound lytic murein transglycosylase A precursor (EC 3.2.1.-) low > 87
Pseudomonas sp. DMC3 0.36 GFF4264 Protein YdgA 0.72 GFF164 hypothetical protein low > 89
Pseudomonas simiae WCS417 0.36 PS417_00735 hypothetical protein 0.71 PS417_26475 transglycosylase low > 88
Pseudomonas fluorescens FW300-N1B4 0.36 Pf1N1B4_1746 GTP-binding protein 0.72 Pf1N1B4_2391 Membrane-bound lytic murein transglycosylase A precursor (EC 3.2.1.-) low > 87
Pseudomonas fluorescens SBW25 0.35 PFLU_RS00730 YdgA family protein 0.71 PFLU_RS28130 murein transglycosylase A low > 109
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS00730 YdgA family protein 0.71 PFLU_RS28130 murein transglycosylase A low > 109
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_10805 hypothetical protein 0.75 AO356_13645 transglycosylase 0.24 85
Pseudomonas lactucae CFBP13502 0.34 GEMAOFIL_00368 Protein YdgA 0.71 GEMAOFIL_05427 Membrane-bound lytic murein transglycosylase A low > 96
Pseudomonas sp. SVBP6 0.34 COO64_RS20210 YdgA family protein 0.69 COO64_RS17525 murein transglycosylase A low > 93
Pseudomonas sp. RS175 0.34 PFR28_04737 Protein YdgA 0.73 PFR28_04195 Membrane-bound lytic murein transglycosylase A low > 88
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_4033 GTP-binding protein 0.75 Pf6N2E2_4647 Membrane-bound lytic murein transglycosylase A precursor (EC 3.2.1.-) low > 103
Pseudomonas orientalis W4I3 0.33 QF045_RS03710 YdgA family protein 0.70 QF045_RS00870 MltA domain-containing protein low > 93
Pseudomonas putida KT2440 0.29 PP_1230 conserved exported protein of unknown function 0.67 PP_4971 putative Outer membrane-bound lytic murein transglycolase A low > 96
Pseudomonas sp. BP01 0.28 JOY50_RS01745 YdgA family protein 0.69 JOY50_RS09840 murein transglycosylase A low > 84
Escherichia coli Nissle 1917 0.15 ECOLIN_RS09010 YdgA family protein 0.16 ECOLIN_RS15675 murein transglycosylase A low > 55
Escherichia fergusonii Becca 0.15 EFB2_02378 Protein YdgA 0.16 EFB2_01104 Membrane-bound lytic murein transglycosylase A low > 86
Escherichia coli BW25113 0.15 b1614 ydgA hypothetical protein (NCBI) 0.16 b2813 mltA membrane-bound lytic murein transglycosylase A (NCBI) low > 76
Escherichia coli BL21 0.15 ECD_01583 DUF945 family protein 0.16 ECD_02664 membrane-bound lytic murein transglycosylase A — —
Escherichia coli ECOR38 0.15 HEPCGN_06010 ydgA Protein YdgA 0.16 HEPCGN_19340 mltA murein transglycosylase A low > 88
Escherichia coli ECRC100 0.15 OKFHMN_27635 ydgA Protein YdgA 0.16 OKFHMN_20085 mltA murein transglycosylase A low > 79
Escherichia coli ECRC102 0.15 NIAGMN_00440 ydgA Protein YdgA 0.16 NIAGMN_17855 mltA murein transglycosylase A — —
Escherichia coli ECRC98 0.15 JDDGAC_02225 ydgA Protein YdgA 0.16 JDDGAC_23750 mltA murein transglycosylase A low > 87
Escherichia coli ECRC99 0.15 KEDOAH_00470 ydgA Protein YdgA 0.16 KEDOAH_08045 mltA murein transglycosylase A — —
Escherichia coli ECRC101 0.14 MCAODC_17775 ydgA Protein YdgA 0.16 MCAODC_10610 mltA murein transglycosylase A low > 87
Escherichia coli ECOR27 0.14 NOLOHH_18140 ydgA Protein YdgA 0.16 NOLOHH_11970 mltA murein transglycosylase A — —
Escherichia coli ECRC62 0.14 BNILDI_16930 ydgA Protein YdgA 0.16 BNILDI_10475 mltA murein transglycosylase A 0.52 59
Escherichia coli HS(pFamp)R (ATCC 700891) 0.14 OHPLBJKB_02112 Protein YdgA 0.16 OHPLBJKB_00918 Membrane-bound lytic murein transglycosylase A low > 74
Castellaniella sp019104865 MT123 0.13 ABCV34_RS00930 YdgA family protein 0.36 ABCV34_RS10265 murein transglycosylase A low > 48

Not shown: 18 genomes with orthologs for Psyr_5005 only; 30 genomes with orthologs for Psyr_0880 only