Conservation of cofitness between Pf1N1B4_3500 and Pf1N1B4_4352 in Pseudomonas fluorescens FW300-N1B4

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N1B4 1.0 Pf1N1B4_3500 D-lactate dehydrogenase (EC 1.1.1.28) 1.0 Pf1N1B4_4352 Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2) 0.25 11
Pseudomonas fluorescens FW300-N2E3 0.90 AO353_02740 hydroxyacid dehydrogenase 0.97 AO353_29310 transporter low > 101
Shewanella sp. ANA-3 0.57 Shewana3_3319 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (RefSeq) 0.71 Shewana3_3096 spermidine/putrescine ABC transporter ATPase subunit (RefSeq) low > 73
Shewanella loihica PV-4 0.53 Shew_0787 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (RefSeq) 0.69 Shew_0974 spermidine/putrescine ABC transporter ATPase subunit (RefSeq) low > 60
Escherichia coli ECOR27 0.52 NOLOHH_19530 ldhA D-lactate dehydrogenase 0.56 NOLOHH_22325 potG putrescine ABC transporter ATP-binding subunit PotG low > 75
Escherichia coli ECOR38 0.52 HEPCGN_26050 ldhA D-lactate dehydrogenase 0.57 HEPCGN_02075 potG putrescine ABC transporter ATP-binding subunit PotG low > 87
Pantoea sp. MT58 0.52 IAI47_09495 2-hydroxyacid dehydrogenase 0.56 IAI47_13040 putrescine ABC transporter ATP-binding subunit PotG low > 76
Escherichia coli BW25113 0.52 b1380 ldhA D-lactate dehydrogenase (NCBI) 0.56 b0855 potG ATP-binding component of putrescine transport system (VIMSS) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_02331 D-lactate dehydrogenase 0.56 OHPLBJKB_02813 Spermidine/putrescine import ATP-binding protein PotA low > 73
Escherichia coli ECRC102 0.52 NIAGMN_25930 ldhA D-lactate dehydrogenase 0.56 NIAGMN_04000 potG putrescine ABC transporter ATP-binding subunit PotG
Escherichia coli ECRC98 0.52 JDDGAC_04285 ldhA D-lactate dehydrogenase 0.56 JDDGAC_09590 potG putrescine ABC transporter ATP-binding subunit PotG low > 86
Escherichia coli ECRC99 0.52 KEDOAH_26640 ldhA D-lactate dehydrogenase 0.56 KEDOAH_21955 potG putrescine ABC transporter ATP-binding subunit PotG
Escherichia coli ECRC101 0.52 MCAODC_16140 ldhA D-lactate dehydrogenase 0.56 MCAODC_25170 potG putrescine ABC transporter ATP-binding subunit PotG low > 87
Escherichia coli ECRC100 0.52 OKFHMN_01795 ldhA D-lactate dehydrogenase 0.56 OKFHMN_05955 potG putrescine ABC transporter ATP-binding subunit PotG low > 80
Escherichia fergusonii Becca 0.52 EFB2_02576 D-lactate dehydrogenase 0.56 EFB2_03206 Spermidine/putrescine import ATP-binding protein PotA low > 86
Escherichia coli BL21 0.52 ECD_01352 fermentative D-lactate dehydrogenase, NAD-dependent 0.56 ECD_00860 putrescine ABC transporter ATPase low > 61
Escherichia coli ECRC62 0.52 BNILDI_17985 ldhA D-lactate dehydrogenase 0.56 BNILDI_20580 potG putrescine ABC transporter ATP-binding subunit PotG low > 75
Escherichia coli Nissle 1917 0.52 ECOLIN_RS08110 D-lactate dehydrogenase 0.56 ECOLIN_RS04555 putrescine ABC transporter ATP-binding subunit PotG
Serratia liquefaciens MT49 0.51 IAI46_13355 2-hydroxyacid dehydrogenase 0.56 IAI46_08375 putrescine ABC transporter ATP-binding subunit PotG low > 86
Echinicola vietnamensis KMM 6221, DSM 17526 0.51 Echvi_3161 Lactate dehydrogenase and related dehydrogenases 0.23 Echvi_1022 ABC-type spermidine/putrescine transport systems, ATPase components low > 79
Enterobacter sp. TBS_079 0.51 MPMX20_02132 D-lactate dehydrogenase 0.56 MPMX20_01496 Spermidine/putrescine import ATP-binding protein PotA low > 85
Klebsiella michiganensis M5al 0.51 BWI76_RS12790 lactate dehydrogenase 0.56 BWI76_RS09465 polyamine ABC transporter ATP-binding protein low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.51 GFF2638 D-lactate dehydrogenase (EC 1.1.1.28) 0.56 GFF759 Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2) low > 78
Dickeya dadantii 3937 0.50 DDA3937_RS12295 2-hydroxyacid dehydrogenase 0.55 DDA3937_RS09465 putrescine ABC transporter ATP-binding subunit PotG low > 74
Rahnella sp. WP5 0.49 EX31_RS06470 2-hydroxyacid dehydrogenase 0.57 EX31_RS09625 putrescine ABC transporter ATP-binding subunit PotG low > 89
Pectobacterium carotovorum WPP14 0.48 HER17_RS09630 2-hydroxyacid dehydrogenase 0.56 HER17_RS12495 putrescine ABC transporter ATP-binding subunit PotG low > 75

Not shown: 38 genomes with orthologs for Pf1N1B4_3500 only; 11 genomes with orthologs for Pf1N1B4_4352 only